RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 NCKAP1Q9Y2A7 1128 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 ENTPD6O75354 484 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 NCR1O76036 304 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 HLA-DPA1P20036 260 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 MC4RP32245 332 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 AVPR1BP47901 424 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 MRPL19P49406 292 aaKnown RBP12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 PTPN5P54829 565 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 RAB8AP61006 207 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 ANGPT1Q15389 498 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 ZBTB6Q15916 424 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 LEXMQ3ZCV2 418 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 TIGD3Q6B0B8 471 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 PLAG1Q6DJT9 500 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 USP30Q70CQ3 517 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 KRT74Q7RTS7 529 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 LUZP2Q86TE4 346 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 TMEM145Q8NBT3 493 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 C9orf43Q8TAL5 461 aaPredicted RBP12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 PPA2Q9H2U2 334 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 SPIN1Q9Y657 262 aaPredicted RBP12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 HS3ST4Q9Y661 456 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 H3BN98 237 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 CASKO14936 926 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 ADAMDEC1O15204 470 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 CSO75390 466 aaKnown RBP12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 OGNP20774 298 aaKnown RBP12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 HOXD10P28358 340 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 KIR3DL1P43629 444 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 GZMMP51124 257 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 AFF1P51825 1210 aaKnown RBP12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 PTGES3Q15185 160 aaKnown RBP12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 SF1Q15637 639 aaKnown RBP12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 CRTC2Q53ET0 693 aaPredicted RBP12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 FRMPD2BQ6IN97 320 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 ERICH5Q6P6B1 374 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 B3GLCTQ6Y288 498 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.58□□□□□ -0.42e-33■■■■□ 26.1
GAPVD1-220ENST00000497580 CD200R1Q8TD46 325 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 LIN7BQ9HAP6 207 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 SLC35C2Q9NQQ7 365 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 PLCXD1Q9NUJ7 323 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 SEC14L4Q9UDX3 406 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 STUB1Q9UNE7 303 aa12.58□□□□□ -0.4
GAPVD1-220ENST00000497580 LOC105369274A0A096LPK9 316 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 ZNF670-ZNF695F2Z2N8 137 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 ACADMP11310 421 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 PNPLA4P41247 253 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 RPL35P42766 123 aaKnown RBP12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 CPT1AP50416 773 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 DSTNP60981 165 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 ZNF33AQ06730 810 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 NOTUMQ6P988 496 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 FAM124AQ86V42 546 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 OR4N4Q8N0Y3 316 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 GPR152Q8TDT2 470 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 CREB3L4Q8TEY5 395 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 NELL1Q92832 810 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 POPDC3Q9HBV1 291 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 PPT2Q9UMR5 302 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 RAI2Q9Y5P3 530 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 LINC00862A6NCI5 91 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 POM121CA8CG34 1229 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 SLC28A1O00337 649 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 IRAK2O43187 625 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 ACSL4O60488 711 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 KCNK5O95279 499 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 TSPAN12O95859 305 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 PLATP00750 562 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 COL4A5P29400 1685 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 CLCN4P51793 760 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 GHDCQ8N2G8 530 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 NINQ8N4C6 2090 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 MYLPFQ96A32 169 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 TCF25Q9BQ70 676 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 SPON2Q9BUD6 331 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 GABARAPL3Q9BY60 117 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 CPNE7Q9UBL6 633 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 MAGEB17A8MXT2 336 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 IGFBP1P08833 259 aaPredicted RBP12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 ITGALP20701 1170 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 CTBP2P56545 445 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 DCDC1P59894 354 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 C1DQ13901 141 aaKnown RBP12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 KLHDC8BQ8IXV7 354 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 BEST4Q8NFU0 473 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 LILRB1Q8NHL6 650 aaPredicted RBP12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 RAD9AQ99638 391 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 NFKBIZQ9BYH8 718 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 TMEM245Q9H330 911 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 B3GAT2Q9NPZ5 323 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 NEU3Q9UQ49 428 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 PCDHGA2Q9Y5H1 932 aa12.57□□□□□ -0.4
GAPVD1-220ENST00000497580 TRBV5-3A0A0A0MS03 114 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 PIPSLA2A3N6 862 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 RAF1P04049 648 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 COX7A2P14406 83 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 LHCGRP22888 699 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 ACVRL1P37023 503 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 EIF4HQ15056 248 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms