RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TAF3Q5VWG9 929 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 ASPHD2Q6ICH7 369 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 CBLN3Q6UW01 205 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 CDHR3Q6ZTQ4 885 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 PATL1Q86TB9 770 aaKnown RBP5.69□□□□□ -1.5
BRCA1-224ENST00000497488 SERINC5Q86VE9 423 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 CHSY1Q86X52 802 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 CROCCP3Q8IVE0 287 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 ARHGEF19Q8IW93 802 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 FOXRED2Q8IWF2 684 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 ADGRF4Q8IZF3 695 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 TDHQ8IZJ6 230 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 SPERTQ8NA61 448 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 ZNF397Q8NF99 534 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-224ENST00000497488 HMGCLL1Q8TB92 370 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 PROKR1Q8TCW9 393 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 DNAJA4Q8WW22 397 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-224ENST00000497488 MCHR2Q969V1 340 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 CBWD1Q9BRT8 395 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 RAB6CQ9H0N0 254 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 MED20Q9H944 212 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 APMAPQ9HDC9 416 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 PKD2L2Q9NZM6 624 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 PPP4R1LQ9P1A2 415 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 B3GAT1Q9P2W7 334 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 LRWD1Q9UFC0 647 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 ST3GAL5Q9UNP4 418 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 N6AMT1Q9Y5N5 214 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 ANKRD30BQ9BXX2 1392 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 IFT172Q9UG01 1749 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 BECN2A8MW95 431 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 NPIPA3F8WFD2 350 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 WRBO00258 174 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 EEF2KO00418 725 aaKnown RBP5.68□□□□□ -1.5
BRCA1-224ENST00000497488 DVL1O14640 695 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 SDC3O75056 442 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 SYNGR4O95473 234 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 BAG3O95817 575 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 MBD3O95983 291 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 ADRB1P08588 477 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 RALBP11234 206 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 CETPP11597 493 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 IRF2P14316 349 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 INSRRP14616 1297 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 CKMT2P17540 419 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 GNL1P36915 607 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-224ENST00000497488 HSD17B2P37059 387 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 AVPR1AP37288 418 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 PTGFRP43088 359 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 PPP3CCP48454 512 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 CEBPDP49716 269 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-224ENST00000497488 MAP2K1Q02750 393 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-224ENST00000497488 CACNG1Q06432 222 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 CRYZQ08257 329 aaKnown RBP5.68□□□□□ -1.5
BRCA1-224ENST00000497488 NONOQ15233 471 aaKnown RBP eCLIP5.68□□□□□ -1.5
BRCA1-224ENST00000497488 CA9Q16790 459 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 VMACQ2NL98 169 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 AGKQ53H12 422 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 SEL1L3Q68CR1 1132 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 C11orf63Q6NUN7 778 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 UGT3A1Q6NUS8 523 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 PACS1Q6VY07 963 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 ZNF813Q6ZN06 617 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 ZNF704Q6ZNC4 412 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-224ENST00000497488 COMMD2Q86X83 199 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 SRRM1Q8IYB3 904 aaKnown RBP5.68□□□□□ -1.5
BRCA1-224ENST00000497488 UBQLNLQ8IYU4 475 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 C1orf52Q8N6N3 182 aaKnown RBP5.68□□□□□ -1.5
BRCA1-224ENST00000497488 NECAB1Q8N987 351 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 ACVR1CQ8NER5 493 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 SLC22A8Q8TCC7 542 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 UBTD2Q8WUN7 234 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 DNAAF4Q8WXU2 420 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 C19orf60Q96EN9 201 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 FAM71F1Q96KD3 344 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-224ENST00000497488 BBC3Q96PG8 261 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-224ENST00000497488 SIKE1Q9BRV8 207 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 MAGT1Q9H0U3 335 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 KLHL31Q9H511 634 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 TMED3Q9Y3Q3 217 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 ATG4BQ9Y4P1 393 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 ASXL1Q8IXJ9 1541 aa5.68□□□□□ -1.5
BRCA1-224ENST00000497488 FAM240BA0A1B0GVZ2 78 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 A0A1W2PP11 408 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 PIPSLA2A3N6 862 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 NPEPPSL1A6NEC2 478 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 ANKRD66B4E2M5 251 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 UBE2Q2LH0YL09 131 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 STMND1H3BQB6 276 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 NDUFS8O00217 210 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 FOXN1O15353 648 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 SNX3O60493 162 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 NMT2O60551 498 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 E2F6O75461 281 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 UFL1O94874 794 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 STAMBPO95630 424 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 SERPINF2P08697 491 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 ITGB6P18564 788 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 DGKAP23743 735 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 SLC6A8P48029 635 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms