RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SERPINA6P08185 405 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 ZGLP1P0C6A0 271 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 SLC35G6P0C7Q6 338 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 IL1RNP18510 177 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 FBLP22087 321 aaKnown RBP8.3□□□□□ -1.08
ITGB1-217ENST00000494395 MMP11P24347 488 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 GSTT1P30711 240 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 FOLR3P41439 243 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 CCR10P46092 362 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 ALDH18A1P54886 795 aaKnown RBP8.3□□□□□ -1.08
ITGB1-217ENST00000494395 KLC1Q07866 573 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 ATP1A4Q13733 1029 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 DOC2AQ14183 400 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 SLBPQ14493 270 aaKnown RBP eCLIP8.3□□□□□ -1.08
ITGB1-217ENST00000494395 PCBP2Q15366 365 aaKnown RBP eCLIP8.3□□□□□ -1.08
ITGB1-217ENST00000494395 TBCCQ15814 346 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 PDK4Q16654 411 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 NDUFA9Q16795 377 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 SYT16Q17RD7 645 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 ADPRMQ3LIE5 342 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 VWA2Q5GFL6 755 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 METTL2BQ6P1Q9 378 aaKnown RBP8.3□□□□□ -1.08
ITGB1-217ENST00000494395 KLC3Q6P597 504 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 RAB43Q86YS6 212 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 ZC3H7AQ8IWR0 971 aaKnown RBP8.3□□□□□ -1.08
ITGB1-217ENST00000494395 TRPV3Q8NET8 790 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 OR9A4Q8NGU2 314 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 ZCCHC10Q8TBK6 192 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 STT3BQ8TCJ2 826 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 UTP15Q8TED0 518 aaKnown RBP8.3□□□□□ -1.08
ITGB1-217ENST00000494395 NACC2Q96BF6 587 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 PTCD3Q96EY7 689 aaKnown RBP8.3□□□□□ -1.08
ITGB1-217ENST00000494395 MMABQ96EY8 250 aaPredicted RBP8.3□□□□□ -1.08
ITGB1-217ENST00000494395 MESP1Q9BRJ9 268 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 C14orf105Q9NVL8 296 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 XPR1Q9UBH6 696 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 OPTCQ9UBM4 332 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 ZNF282Q9UDV7 671 aaPredicted RBP8.3□□□□□ -1.08
ITGB1-217ENST00000494395 NXT1Q9UKK6 140 aaKnown RBP8.3□□□□□ -1.08
ITGB1-217ENST00000494395 ZNF490Q9ULM2 529 aaPredicted RBP8.3□□□□□ -1.08
ITGB1-217ENST00000494395 CDC14AQ9UNH5 594 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 HS3ST3B1Q9Y662 390 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 SCN2AQ99250 2005 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 BOD1L1Q8NFC6 3051 aa8.3□□□□□ -1.08
ITGB1-217ENST00000494395 TMEM238LA0A1B0GVL6 79 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 A0A1W2PQ72 361 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 E2F3O00716 465 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 FFAR3O14843 346 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 CLGNO14967 610 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 GPR42O15529 346 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 GALR3O60755 368 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-217ENST00000494395 DNAJB5O75953 348 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 KLHL18O94889 574 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 SIX3O95343 332 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-217ENST00000494395 B3GALT4O96024 378 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 GHRHP01286 108 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 RBP1P09455 135 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 NUDT17P0C025 328 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 ZNF888P0CJ79 500 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-217ENST00000494395 ARAFP10398 606 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 CXCR2P25025 360 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 GSTM2P28161 218 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 HNRNPH1P31943 449 aaKnown RBP8.29□□□□□ -1.08
ITGB1-217ENST00000494395 HSD17B3P37058 310 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 MAT1AQ00266 395 aaKnown RBP8.29□□□□□ -1.08
ITGB1-217ENST00000494395 CHAF1BQ13112 559 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 CHIT1Q13231 466 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 KCNAB2Q13303 367 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 HERC3Q15034 1050 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 RBBP5Q15291 538 aaKnown RBP8.29□□□□□ -1.08
ITGB1-217ENST00000494395 PFKFB4Q16877 469 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 ERCC6LQ2NKX8 1250 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 LGSNQ5TDP6 509 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 ADNP2Q6IQ32 1131 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 TMIGD1Q6UXZ0 262 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 SHISA6Q6ZSJ9 500 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 MED25Q71SY5 747 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 LCA5Q86VQ0 697 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 LAS2Q8IYD9 372 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 CNPY4Q8N129 248 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 ZNF843Q8N446 348 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 TBC1D19Q8N5T2 526 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 TMEM102Q8N9M5 508 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-217ENST00000494395 SNX31Q8N9S9 440 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 TTLQ8NG68 377 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 ACMSDQ8TDX5 336 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 UBLCP1Q8WVY7 318 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-217ENST00000494395 CAVIN3Q969G5 261 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 SEC16BQ96JE7 1060 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 IP6K3Q96PC2 410 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 MRPL57Q9BQC6 102 aaKnown RBP8.29□□□□□ -1.08
ITGB1-217ENST00000494395 EFCAB11Q9BUY7 163 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 C1QTNF3Q9BXJ4 246 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 ING2Q9H160 280 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 RASSF4Q9H2L5 321 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 MRPL46Q9H2W6 279 aaKnown RBP8.29□□□□□ -1.08
ITGB1-217ENST00000494395 RHBGQ9H310 441 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 KLHL31Q9H511 634 aa8.29□□□□□ -1.08
ITGB1-217ENST00000494395 SOX17Q9H6I2 414 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-217ENST00000494395 PPCSQ9HAB8 311 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms