RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ASF1AQ9Y294 204 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 BTBD3Q9Y2F9 522 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 TRPM6Q9BX84 2022 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 CLIC1O00299 241 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 CDK2AP1O14519 115 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 CPNE6O95741 557 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 SERPINA1P01009 418 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 CCDC159P0C7I6 412 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 TTKP33981 857 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 TAS2R38P59533 333 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 CDK3Q00526 305 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 VAC14Q08AM6 782 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 SPIDRQ14159 915 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 HKDC1Q2TB90 917 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 DEPDC1Q5TB30 811 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 SYCE2Q6PIF2 218 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 UNC5DQ6UXZ4 953 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 ZNF621Q6ZSS3 439 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 BTLAQ7Z6A9 289 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 AMZ2Q86W34 360 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 CLECL1Q8IZS7 167 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 SPARTQ8N0X7 666 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 DTX3Q8N9I9 347 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 CHDHQ8NE62 594 aaPredicted RBP13.23□□□□□ -0.29
VCP-207ENST00000493886 BORCS5Q969J3 196 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 MYOCQ99972 504 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 DUSP26Q9BV47 211 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 ERVK-11Q9UQG0 969 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 GPC6Q9Y625 555 aaPredicted RBP13.23□□□□□ -0.29
VCP-207ENST00000493886 YY2O15391 372 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 LINC01565O15544 149 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 DIRAS1O95057 198 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 PCDH8O95206 1070 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 EPN2O95208 641 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 CPSF4O95639 269 aaKnown RBP13.22□□□□□ -0.29
VCP-207ENST00000493886 APODP05090 189 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 ENGP17813 658 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 TIA1P31483 386 aaKnown RBP eCLIP13.22□□□□□ -0.29
VCP-207ENST00000493886 SPCS2Q15005 226 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 WSCD2Q2TBF2 565 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 PAGE2BQ5JRK9 111 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 AGBL4Q5VU57 503 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.22□□□□□ -0.29
VCP-207ENST00000493886 PDZD3Q86UT5 571 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 LAS2Q8IYD9 372 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 CHPFQ8IZ52 775 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 SLC5A11Q8WWX8 675 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 MYADMQ96S97 322 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 LGR4Q9BXB1 951 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 EHD1Q9H4M9 534 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 DNAJB9Q9UBS3 223 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 SLC23A2Q9UGH3 650 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 GNG14A0A1W2PPG7 69 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 PIPSLA2A3N6 862 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 GABRR3A8MPY1 467 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 ABCB7O75027 752 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 ADAM23O75077 832 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 INMTO95050 263 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 RPA4Q13156 261 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 AQP6Q13520 282 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 CST6Q15828 149 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 HIST2H2ACQ16777 129 aaPredicted RBP13.22□□□□□ -0.29
VCP-207ENST00000493886 ZNF829Q3KNS6 432 aaPredicted RBP13.22□□□□□ -0.29
VCP-207ENST00000493886 CPTPQ5TA50 214 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 HIST2H2AA3Q6FI13 130 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 NXPE4Q6UWF7 544 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 CCDC81Q6ZN84 652 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 SERPINA11Q86U17 422 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 SLC38A6Q8IZM9 456 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 ZNF555Q8NEP9 628 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 OR5AR1Q8NGP9 310 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 RAD51AP1Q96B01 352 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 SH3KBP1Q96B97 665 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 IL17FQ96PD4 163 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 MAGIXQ9H6Y5 334 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 MAPRE3Q9UPY8 281 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 MYO9BQ13459 2157 aa13.22□□□□□ -0.29
VCP-207ENST00000493886 FOXE1O00358 373 aaPredicted RBP13.21□□□□□ -0.29
VCP-207ENST00000493886 PCDH7O60245 1069 aa13.21□□□□□ -0.29
VCP-207ENST00000493886 OCM2P0CE71 109 aa13.21□□□□□ -0.29
VCP-207ENST00000493886 OCMP0CE72 109 aaPredicted RBP13.21□□□□□ -0.29
VCP-207ENST00000493886 EFNA1P20827 205 aaPredicted RBP13.21□□□□□ -0.29
VCP-207ENST00000493886 GDI1P31150 447 aa13.21□□□□□ -0.29
VCP-207ENST00000493886 RCVRNP35243 200 aa13.21□□□□□ -0.29
VCP-207ENST00000493886 CLK1P49759 484 aaKnown RBP13.21□□□□□ -0.29
VCP-207ENST00000493886 MEF2AQ02078 507 aaPredicted RBP13.21□□□□□ -0.29
VCP-207ENST00000493886 RELAQ04206 551 aa13.21□□□□□ -0.29
VCP-207ENST00000493886 ITGADQ13349 1161 aa13.21□□□□□ -0.29
VCP-207ENST00000493886 LRRTM4Q86VH4 590 aa13.21□□□□□ -0.29
VCP-207ENST00000493886 BARD1Q99728 777 aaKnown RBP13.21□□□□□ -0.29
VCP-207ENST00000493886 FUNDC2Q9BWH2 189 aa13.21□□□□□ -0.29
VCP-207ENST00000493886 SPNS1Q9H2V7 528 aa13.21□□□□□ -0.29
VCP-207ENST00000493886 DMRT3Q9NQL9 472 aa13.21□□□□□ -0.29
VCP-207ENST00000493886 PLAGL1Q9UM63 463 aa13.21□□□□□ -0.29
VCP-207ENST00000493886 RFXAPO00287 272 aa13.21□□□□□ -0.3
VCP-207ENST00000493886 PI15O43692 258 aa13.21□□□□□ -0.3
VCP-207ENST00000493886 SEC14L2O76054 403 aa13.21□□□□□ -0.3
VCP-207ENST00000493886 ZNF682O95780 498 aa13.21□□□□□ -0.3
VCP-207ENST00000493886 IL1RNP18510 177 aa13.21□□□□□ -0.3
VCP-207ENST00000493886 HPCAL1P37235 193 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms