RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 SP1P08047 785 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 ESRRAP11474 423 aaPredicted RBP11.69□□□□□ -0.54
COL6A1-205ENST00000492851 MST1P26927 711 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 CYB561P49447 251 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 TAS2R39P59534 338 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 RAB8AP61006 207 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 ATP6V0D1P61421 351 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 CALCOCO2Q13137 446 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 TERF2Q15554 542 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 FCRLBQ6BAA4 426 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 SPINK14Q6IE38 97 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 XKRXQ6PP77 449 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 TMIGD1Q6UXZ0 262 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 KLHDC8AQ8IYD2 350 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 ZBED8Q8IZ13 594 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 CYP4X1Q8N118 509 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 EID3Q8N140 333 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 ZNF808Q8N4W9 903 aaPredicted RBP11.69□□□□□ -0.54
COL6A1-205ENST00000492851 TSLPQ969D9 159 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 TMEM125Q96AQ2 219 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 PWWP2AQ96N64 755 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 SIGLEC12Q96PQ1 595 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 RBCK1Q9BYM8 510 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 DEFB126Q9BYW3 111 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 DERL2Q9GZP9 239 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 CDCP1Q9H5V8 836 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 TRIM45Q9H8W5 580 aaPredicted RBP11.69□□□□□ -0.54
COL6A1-205ENST00000492851 SLC17A6Q9P2U8 582 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 MRPS33Q9Y291 106 aaKnown RBP11.69□□□□□ -0.54
COL6A1-205ENST00000492851 ICE1Q9Y2F5 2266 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 DOCK10Q96BY6 2186 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 NBPF19A0A087WUL8 3843 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 TCRBV16S1A1N1A0A5B0 115 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 FAM187AA6NFU0 413 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 ANKDD1BA6NHY2 528 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 SAGE2PA6NJ88 616 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 PRSS44E7EML9 344 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 SLC19A2O60779 497 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 WDR47O94967 919 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 GSTA2P09210 222 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 AGAP20933 346 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 TRHRP34981 398 aaPredicted RBP11.68□□□□□ -0.54
COL6A1-205ENST00000492851 GGT5P36269 586 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 HNF4AP41235 474 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 CLCN2P51788 898 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 SMSP52788 366 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 HSD17B7P56937 341 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 TGM3Q08188 693 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 MRGPRGQ86SM5 289 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 ARMC10Q8N2F6 343 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 ANKRD53Q8N9V6 530 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 POGLUT1Q8NBL1 392 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 CREB3L4Q8TEY5 395 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 GAL3ST3Q96A11 431 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 RHBDF1Q96CC6 855 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 MAGED4Q96JG8 741 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 GPR137Q96N19 417 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 TRIM51Q9BSJ1 452 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 TRIM31Q9BZY9 425 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 KCNF1Q9H3M0 494 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 EHD1Q9H4M9 534 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 KLHL1Q9NR64 748 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 WHRNQ9P202 907 aa11.68□□□□□ -0.54
COL6A1-205ENST00000492851 HEATR5BQ9P2D3 2071 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 LRIT2A6NDA9 550 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 NPEPPSL1A6NEC2 478 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 KLRC4-KLRK1H3BQV0 150 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 CLGNO14967 610 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 B3GALT2O43825 422 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 CLEC3AO75596 197 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 NEURL1O76050 574 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 STMN1P16949 149 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 SLC6A12P48065 614 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 HLCSP50747 726 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 OLR1P78380 273 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 BTN3A2P78410 334 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 BTG2P78543 158 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 SRSF11Q05519 484 aaKnown RBP11.67□□□□□ -0.54
COL6A1-205ENST00000492851 HYAL2Q12891 473 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 LAPTM5Q13571 262 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 TGFBIQ15582 683 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 TSNQ15631 228 aaKnown RBP11.67□□□□□ -0.54
COL6A1-205ENST00000492851 MAPKAPK3Q16644 382 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 HIST2H2ACQ16777 129 aaPredicted RBP11.67□□□□□ -0.54
COL6A1-205ENST00000492851 PAGE2BQ5JRK9 111 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 TOR1AIP1Q5JTV8 583 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 HIST2H2AA3Q6FI13 130 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 SULT1C3Q6IMI6 304 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 TRIM40Q6P9F5 258 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 BNC2Q6ZN30 1099 aaPredicted RBP11.67□□□□□ -0.54
COL6A1-205ENST00000492851 SLCO4C1Q6ZQN7 724 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 GALNTL5Q7Z4T8 443 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 GPSM1Q86YR5 675 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 SPPL2CQ8IUH8 684 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 SRFBP1Q8NEF9 429 aaKnown RBP11.67□□□□□ -0.54
COL6A1-205ENST00000492851 B3GNT7Q8NFL0 401 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 MARVELD3Q96A59 401 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 KRT12Q99456 494 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 NPAS2Q99743 824 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 CPNE1Q99829 537 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms