RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 AGRPO00253 132 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 SLC1A7O00341 560 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 C6orf47O95873 294 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 ETFAP13804 333 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 ASMTP46597 345 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 HBA1P69905 142 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 ZNF33BQ06732 778 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 AQP6Q13520 282 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 MPEG1Q2M385 716 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 BCL7AQ4VC05 210 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 PIK3C3Q8NEB9 887 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 OR5AR1Q8NGP9 310 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 CNDP2Q96KP4 475 aaKnown RBP12.34□□□□□ -0.43
PRAME-213ENST00000492657 RHNO1Q9BSD3 238 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 ZDHHC5Q9C0B5 715 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 CHST8Q9H2A9 424 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 TRIM39Q9HCM9 518 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 PRDM8Q9NQV8 689 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 SLC23A2Q9UGH3 650 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 BTNL2Q9UIR0 455 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 ERGIC3Q9Y282 383 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 SAMHD1Q9Y3Z3 626 aaKnown RBP12.34□□□□□ -0.43
PRAME-213ENST00000492657 ORC6Q9Y5N6 252 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 KIAA1549LQ6ZVL6 1849 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 TRIM64BA6NI03 449 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 SLC16A6O15403 523 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 INMTO95050 263 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 KLK1P06870 262 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 GSTM2P28161 218 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 CRATP43155 626 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 HNRNPFP52597 415 aaKnown RBP12.33□□□□□ -0.43
PRAME-213ENST00000492657 C21orf58P58505 322 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 PCDH1Q08174 1060 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 C2orf80Q0P641 193 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 EPS8Q12929 822 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 FOXD4Q12950 439 aaPredicted RBP12.33□□□□□ -0.43
PRAME-213ENST00000492657 SMN1Q16637 294 aaKnown RBP12.33□□□□□ -0.43
PRAME-213ENST00000492657 CYP27C1Q4G0S4 372 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 IQCCQ4KMZ1 466 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 SPIN4Q56A73 249 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 HORMAD1Q86X24 394 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 OR5AK3PQ8NH89 298 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 FUNDC2Q9BWH2 189 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 SGPP1Q9BX95 441 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 RAD21L1Q9H4I0 556 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 DMRT3Q9NQL9 472 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 RPS6KA6Q9UK32 745 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 BAG5Q9UL15 447 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 ZNF451Q9Y4E5 1061 aa12.33□□□□□ -0.43
PRAME-213ENST00000492657 GPC6Q9Y625 555 aaPredicted RBP12.33□□□□□ -0.43
PRAME-213ENST00000492657 TPD52L2O43399 206 aaKnown RBP12.33□□□□□ -0.44
PRAME-213ENST00000492657 ZNF12P17014 697 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 ACADLP28330 430 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 HPCAL1P37235 193 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 DMPKQ09013 629 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 TUBA3CQ13748 450 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 E2F2Q14209 437 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 GTF2IRD2BQ6EKJ0 949 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 ERICH5Q6P6B1 374 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 C11orf96Q7Z7L8 435 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 GTF2IRD2Q86UP8 949 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.33□□□□□ -0.44
PRAME-213ENST00000492657 EPHX3Q9H6B9 360 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 TMEM184CQ9NVA4 438 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 ASF1AQ9Y294 204 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 SNX5Q9Y5X3 404 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 SOBPA7XYQ1 873 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 AQP9O43315 295 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 CLPXO76031 633 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 DNAJA1P31689 397 aaKnown RBP12.33□□□□□ -0.44
PRAME-213ENST00000492657 TGFBR1P36897 503 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 WASP42768 502 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 MVDP53602 400 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 PNLIPRP1P54315 467 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 TAS2R50P59544 299 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 KCNJ10P78508 379 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 KCNJ8Q15842 424 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 KDM4DQ6B0I6 523 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 FAM109BQ6ICB4 259 aaPredicted RBP12.33□□□□□ -0.44
PRAME-213ENST00000492657 NIPAL1Q6NVV3 410 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 NXPE4Q6UWF7 544 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 TSEN54Q7Z6J9 526 aaKnown RBP12.33□□□□□ -0.44
PRAME-213ENST00000492657 PGBD3Q8N328 593 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 TMIEQ8NEW7 156 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 VPS37AQ8NEZ2 397 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 C16orf78Q8WTQ4 265 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 SLC5A11Q8WWX8 675 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 C7orf34Q96L11 122 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 LGR4Q9BXB1 951 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 REEP4Q9H6H4 257 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 WDR70Q9NW82 654 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 ERVK-18Q9QC07 812 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 SPASTQ9UBP0 616 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 HCN2Q9UL51 889 aa12.33□□□□□ -0.44
PRAME-213ENST00000492657 MYO10Q9HD67 2058 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 F5P12259 2224 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 EDDM13A0A1B0GTR0 161 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 TBC1D3BA6NDS4 549 aa12.32□□□□□ -0.44
PRAME-213ENST00000492657 BCAS1O75363 584 aaPredicted RBP12.32□□□□□ -0.44
PRAME-213ENST00000492657 FPR1P21462 350 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms