RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 HCN3Q9P1Z3 774 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 ZNF222Q9UK12 451 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 ING1Q9UK53 422 aaPredicted RBP9.34□□□□□ -0.91
VPS8-225ENST00000492449 TRABD2BA6NFA1 517 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 KLK8O60259 260 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 SULT1A3P0DMM9 295 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 SULT1A4P0DMN0 295 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 DNASE1P24855 282 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 SSTR2P30874 369 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 AIF1P55008 147 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 ABHD18Q0P651 414 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 GPR17Q13304 367 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 ZNF124Q15973 351 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 SNAPC1Q16533 368 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 MAPKAPK3Q16644 382 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 C5orf46Q6UWT4 87 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 ZNF730Q6ZMV8 503 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 GCNT7Q6ZNI0 430 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 CATSPERGQ6ZRH7 1159 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 C12orf40Q86WS4 652 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 MIB1Q86YT6 1006 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 CILP2Q8IUL8 1156 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 CHCHD4Q8N4Q1 142 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 LINC00116Q8NCU8 138 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 PHOSPHO2Q8TCD6 241 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 NT5C3BQ969T7 300 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 KCNC2Q96PR1 638 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 SARGQ9BW04 601 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 B3GNT5Q9BYG0 378 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 FEM1BQ9UK73 627 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 ACAD8Q9UKU7 415 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 PDCD11Q14690 1871 aaKnown RBP9.34□□□□□ -0.91
VPS8-225ENST00000492449 DENND4AQ7Z401 1863 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 G3V3Q6 166 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 GTPBP1O00178 669 aaKnown RBP9.33□□□□□ -0.92
VPS8-225ENST00000492449 PLATP00750 562 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 IL6P05231 212 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 EVX1P49640 407 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 YWHAHQ04917 246 aaPredicted RBP9.33□□□□□ -0.92
VPS8-225ENST00000492449 DSG2Q14126 1118 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 AP5B1Q2VPB7 878 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 ZNF528Q3MIS6 628 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 ARHGAP15Q53QZ3 475 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 OTUD1Q5VV17 481 aaPredicted RBP9.33□□□□□ -0.92
VPS8-225ENST00000492449 NOTUMQ6P988 496 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 ABHD15Q6UXT9 468 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 C3P1Q6ZMU1 363 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 RAB11FIP2Q7L804 512 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 SHFQ7M4L6 423 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 FAM131BQ86XD5 332 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 DMBX1Q8NFW5 382 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 OR1M1Q8NGA1 313 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 WDR36Q8NI36 951 aaKnown RBP9.33□□□□□ -0.92
VPS8-225ENST00000492449 CXorf58Q96LI9 332 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 PPP3R2Q96LZ3 170 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 FCRL5Q96RD9 977 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 CCM2Q9BSQ5 444 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 TINAGL1Q9GZM7 467 aaPredicted RBP9.33□□□□□ -0.92
VPS8-225ENST00000492449 FAM198AQ9UFP1 575 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 RPS6KA6Q9UK32 745 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 MGAT4BQ9UQ53 548 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 ISM1B1AKI9 464 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 SLC28A1O00337 649 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 PDCD5O14737 125 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 MPZL2O60487 215 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 NDUFS6O75380 124 aaKnown RBP9.33□□□□□ -0.92
VPS8-225ENST00000492449 ANXA9O76027 345 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 CBX7O95931 251 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 LCP1P13796 627 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 ERCC2P18074 760 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 NNMTP40261 264 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 KCNJ5P48544 419 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 VLDLRP98155 873 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 TIAL1Q01085 375 aaKnown RBP eCLIP9.33□□□□□ -0.92
VPS8-225ENST00000492449 C2orf80Q0P641 193 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 MLLT11Q13015 90 aaPredicted RBP9.33□□□□□ -0.92
VPS8-225ENST00000492449 FRMPD2BQ6IN97 320 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 CNIH2Q6PI25 160 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 SEZ6L2Q6UXD5 910 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 ABI3BPQ7Z7G0 1075 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 SPNS2Q8IVW8 549 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 CDAN1Q8IWY9 1227 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 FAM120BQ96EK7 910 aaKnown RBP9.33□□□□□ -0.92
VPS8-225ENST00000492449 ZDHHC15Q96MV8 337 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 TOX2Q96NM4 488 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 OR51J1Q9H342 316 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 PTPRHQ9HD43 1115 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 FZD3Q9NPG1 666 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 SEMA4BQ9NPR2 832 aaPredicted RBP9.33□□□□□ -0.92
VPS8-225ENST00000492449 TXNL4BQ9NX01 149 aaKnown RBP9.33□□□□□ -0.92
VPS8-225ENST00000492449 PCTPQ9UKL6 214 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 CSADQ9Y600 493 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 RRN3P2A6NIE6 340 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 HPGDSO60760 199 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 GLAP06280 429 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 LPLP06858 475 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 RAG2P55895 527 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 CYP4F8P98187 520 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 TEAD4Q15561 434 aa9.33□□□□□ -0.92
VPS8-225ENST00000492449 SPIN4Q56A73 249 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms