RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 SERHLQ9NQF3 203 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 DNAJC11Q9NVH1 559 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 H2AFY2Q9P0M6 372 aaPredicted RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 SLC6A14Q9UN76 642 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 ING4Q9UNL4 249 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 CLCA2Q9UQC9 943 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 PCDHB1Q9Y5F3 818 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 HSPE1-MOB4S4R3N1 261 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 GPX5O75715 221 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 IFNA14P01570 189 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 IGFBP1P08833 259 aaPredicted RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 PRR35P0CG20 571 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 CORO1AP31146 461 aaKnown RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 SDC2P34741 201 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 HTR7P34969 479 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 GPC1P35052 558 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 MAP2K3P46734 347 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 RPS7P62081 194 aaKnown RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 PTGES3Q15185 160 aaKnown RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 GCNT6Q5T4J0 391 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 BHLHB9Q6PI77 547 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 TMIGD1Q6UXZ0 262 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 LINC01465Q8N7H1 131 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 ZNF557Q8N988 423 aaPredicted RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 KLHL6Q8WZ60 621 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 TRIB2Q92519 343 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 SLC7A6Q92536 515 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 RAB8BQ92930 207 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 TBX5Q99593 518 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 DPCDQ9BVM2 203 aaPredicted RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 RACGAP1Q9H0H5 632 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 SLC32A1Q9H598 525 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 PPT2Q9UMR5 302 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 DNAJC25-GNG10A0A024R161 153 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 SNTNA6NMZ2 147 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 INMT-MINDY4F8WBC2 141 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 PLD2O14939 933 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 ACSL4O60488 711 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 C6orf47O95873 294 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 TGFB1P01137 390 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 SLC9A3P48764 834 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 SRSF11Q05519 484 aaKnown RBP9.46□□□□□ -0.89
ERCC3-208ENST00000491292 FGFBP1Q14512 234 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 ZMYND11Q15326 602 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 CCL14Q16627 93 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 CHMP1BQ7LBR1 199 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 GPR150Q8NGU9 434 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 NPLOC4Q8TAT6 608 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 ZNF431Q8TF32 576 aaPredicted RBP9.46□□□□□ -0.89
ERCC3-208ENST00000491292 ISG20Q96AZ6 181 aaKnown RBP9.46□□□□□ -0.89
ERCC3-208ENST00000491292 TM9SF2Q99805 663 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 RTP3Q9BQQ7 232 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 SLC35A5Q9BS91 424 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 DOHHQ9BU89 302 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 HDHD5Q9BXW7 423 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 YARS2Q9Y2Z4 477 aaKnown RBP9.46□□□□□ -0.89
ERCC3-208ENST00000491292 ARID1AO14497 2285 aa9.46□□□□□ -0.89
ERCC3-208ENST00000491292 ORC5O43913 435 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 JUNDP17535 347 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 SSTR2P30874 369 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 HOXA9P31269 272 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 P2RX3P56373 397 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 DCDC1P59894 354 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 GALK2Q01415 458 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 FADDQ13158 208 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 CLPPQ16740 277 aaPredicted RBP9.46□□□□□ -0.9
ERCC3-208ENST00000491292 IDNKQ5T6J7 187 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 SBSNQ6UWP8 590 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 LHFPL3Q86UP9 236 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 RNF130Q86XS8 419 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 ZNF280BQ86YH2 543 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 VWA5B2Q8N398 1253 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 NLGN2Q8NFZ4 835 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 GATAD2BQ8WXI9 593 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 C11orf24Q96F05 449 aaPredicted RBP9.46□□□□□ -0.9
ERCC3-208ENST00000491292 ZFP3Q96NJ6 502 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 SLX1AQ9BQ83 275 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 CCDC32Q9BV29 185 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 VPS29Q9UBQ0 182 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 MED16Q9Y2X0 877 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 TEX46H3BTG2 121 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 TAPBPO15533 448 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 KCNK5O95279 499 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 EPOP01588 193 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 OR56A5P0C7T3 313 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 AVPR1BP47901 424 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 NRIP1P48552 1158 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 BNC1Q01954 994 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 MEF2AQ02078 507 aaPredicted RBP9.46□□□□□ -0.9
ERCC3-208ENST00000491292 RPA4Q13156 261 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 MAB21L1Q13394 359 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 PCBP2Q15366 365 aaKnown RBP eCLIP9.46□□□□□ -0.9
ERCC3-208ENST00000491292 KLHL12Q53G59 568 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 BHLHA9Q7RTU4 235 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 ZNF367Q7RTV3 350 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 CCDC71Q8IV32 467 aaPredicted RBP9.46□□□□□ -0.9
ERCC3-208ENST00000491292 CSGALNACT1Q8TDX6 532 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 TSSK6Q9BXA6 273 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 SLA2Q9H6Q3 261 aa9.46□□□□□ -0.9
ERCC3-208ENST00000491292 GALNT9Q9HCQ5 603 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms