RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, human

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSX2IP-208	ENST00000490476	FCRL4	Q96PJ5	515 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	TUBB2B	Q9BVA1	445 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	RAB6C	Q9H0N0	254 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	UBTD1	Q9HAC8	227 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ARMCX3	Q9UH62	379 aa	Predicted RBP	4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	KIAA1549L	Q6ZVL6	1849 aa		4.55	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MN1	Q10571	1320 aa	Predicted RBP	4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MEGF8	Q7Z7M0	2845 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ZCWPW2	A0A1B0GU75	182 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476		A4D1N5	150 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ZNF587B	E7ETH6	402 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	OR10H2	O60403	315 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MOCS3	O95396	460 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	LDLR	P01130	860 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	TFAP2A	P05549	437 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	H1F0	P07305	194 aa	Known RBP	4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	RNF224	P0DH78	156 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	SMIM18	P0DKX4	95 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	GHR	P10912	638 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	FCGR1A	P12314	374 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	HLA-DOB	P13765	273 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	CKMT2	P17540	419 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ITGB6	P18564	788 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	FBL	P22087	321 aa	Known RBP	4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	CDC25C	P30307	473 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	USP8	P40818	1118 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MMP15	P51511	669 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	TUBA1B	P68363	451 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	PNRC1	Q12796	327 aa	Predicted RBP	4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	SLC39A14	Q15043	492 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	C6orf136	Q5SQH8	315 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	FAM91A1	Q658Y4	838 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	C11orf88	Q6PI97	169 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	OTOA	Q7RTW8	1153 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ARHGAP22	Q7Z5H3	698 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ABI3BP	Q7Z7G0	1075 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	KMT5C	Q86Y97	462 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	CRYBG2	Q8N1P7	616 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ARHGAP24	Q8N264	748 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ZNF611	Q8N823	705 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MSANTD4	Q8NCY6	345 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	RDM1	Q8NG50	284 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	SMG7	Q92540	1137 aa	Known RBP	4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	CORO2A	Q92828	525 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	DNASE1L2	Q92874	299 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	LINGO1	Q96FE5	620 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	NAF1	Q96HR8	494 aa	Known RBP	4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ADGRG7	Q96K78	797 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	FEV	Q99581	238 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	NEURL2	Q9BR09	285 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	PUS3	Q9BZE2	481 aa	Known RBP	4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	C2orf40	Q9H1Z8	148 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	FN3K	Q9H479	309 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	SNX7	Q9UNH6	387 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MGAM2	Q2M2H8	2515 aa		4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476		A0A1W2PPQ1	181 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	CCDC188	H7C350	402 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	PTGES	O14684	152 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	CXCL14	O95715	111 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	VIM	P08670	466 aa	Known RBP	4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	CDH1	P12830	882 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	TCF4	P15884	667 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	CBL	P22681	906 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ARCN1	P48444	511 aa	Known RBP	4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ASCL1	P50553	236 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	UBASH3A	P57075	661 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	TUBB4B	P68371	445 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	DMPK	Q09013	629 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ZNF674	Q2M3X9	581 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MDH1B	Q5I0G3	518 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	STXBP5	Q5T5C0	1151 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	GRTP1	Q5TC63	336 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	FHL5	Q5TD97	284 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	PLXDC2	Q6UX71	529 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MSANTD1	Q6ZTZ1	278 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	CREB3L2	Q70SY1	520 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	HOOK3	Q86VS8	718 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ERICH1	Q86X53	443 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ZNF441	Q8N8Z8	693 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ZNF248	Q8NDW4	579 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	LILRB1	Q8NHL6	650 aa	Predicted RBP	4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	HEXDC	Q8WVB3	486 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	SSMEM1	Q8WWF3	244 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	NSMAF	Q92636	917 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ST6GALNAC6	Q969X2	333 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MOB3A	Q96BX8	217 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	BSCL2	Q96G97	398 aa	Predicted RBP	4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ZNF385A	Q96PM9	386 aa	Known RBP	4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	SLX1A	Q9BQ83	275 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	IL25	Q9H293	177 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	PANK3	Q9H999	370 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476		Q9N2K0	584 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	ACKR4	Q9NPB9	350 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	POU2F3	Q9UKI9	436 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	SNX5	Q9Y5X3	404 aa		4.53	□□□□□ -1.68
SSX2IP-208	ENST00000490476	MYH4	Q9Y623	1939 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms