RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 ERVK-18Q9QC07 812 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 OPTCQ9UBM4 332 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 USP34Q70CQ2 3546 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 BTN3A1O00481 513 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 XPNPEP2O43895 674 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 APBB3O95704 486 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 JUNDP17535 347 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 TRIM23P36406 574 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 SEPHS1P49903 392 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 IST1P53990 364 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 CLCA4Q14CN2 919 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 UBE2UQ5VVX9 321 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 SIGIRRQ6IA17 410 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 PRR23CQ6ZRP0 262 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 HID1Q8IV36 788 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 VRK3Q8IV63 474 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 IL17RDQ8NFM7 739 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 LGALS12Q96DT0 336 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 C1QTNF7Q9BXJ2 289 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 TEX101Q9BY14 249 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 DERL2Q9GZP9 239 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 DUSP21Q9H596 190 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 CARS2Q9HA77 564 aaKnown RBP13.18□□□□□ -0.3
COPS7B-221ENST00000488111 ZNF221Q9UK13 617 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 ANGPTL3Q9Y5C1 460 aa13.18□□□□□ -0.3
COPS7B-221ENST00000488111 METTL15A6NJ78 407 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 AP2A2O94973 939 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 GGT1P19440 569 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 AOAHP28039 575 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 CXCL12P48061 93 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 MASP1P48740 699 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 ST13P50502 369 aaKnown RBP13.17□□□□□ -0.3
COPS7B-221ENST00000488111 GTF2H3Q13889 308 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 CCDC58Q4VC31 144 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 COLEC12Q5KU26 742 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 ANKRD34AQ69YU3 496 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 TRIM69Q86WT6 500 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 PLD3Q8IV08 490 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 ZNF547Q8IVP9 402 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 PEX5LQ8IYB4 626 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 HS3ST5Q8IZT8 346 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 FAM83FQ8NEG4 500 aaPredicted RBP13.17□□□□□ -0.3
COPS7B-221ENST00000488111 OR6F1Q8NGZ6 308 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 PROX1Q92786 737 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 FOXJ1Q92949 421 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 KCNA7Q96RP8 456 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 BRINP2Q9C0B6 783 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 PIF1Q9H611 641 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 KAT8Q9H7Z6 458 aaKnown RBP13.17□□□□□ -0.3
COPS7B-221ENST00000488111 CRNNQ9UBG3 495 aaPredicted RBP13.17□□□□□ -0.3
COPS7B-221ENST00000488111 C3orf18Q9UK00 162 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 IGHV1OR15-9A0A0B4J2B8 117 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 EVPLLA8MZ36 301 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 SCAMP1O15126 338 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 PRKD3O94806 890 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 ANGPTL1O95841 491 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 IGLV3-19P01714 112 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 IGHV4-34P06331 123 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 LINC00032P0C843 101 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 PRLHRP49683 370 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 SLC35A2P78381 396 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 SIGLEC14Q08ET2 396 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 KRR1Q13601 381 aaKnown RBP13.17□□□□□ -0.3
COPS7B-221ENST00000488111 NPTX1Q15818 432 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 ZNF404Q494X3 552 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 ZC3H12BQ5HYM0 836 aaKnown RBP13.17□□□□□ -0.3
COPS7B-221ENST00000488111 TSSK4Q6SA08 328 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 CCBE1Q6UXH8 406 aaPredicted RBP13.17□□□□□ -0.3
COPS7B-221ENST00000488111 PRR23BQ6ZRT6 265 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 CNIH3Q8TBE1 160 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 SKA2Q8WVK7 121 aaPredicted RBP13.17□□□□□ -0.3
COPS7B-221ENST00000488111 CCM2Q9BSQ5 444 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 APOOQ9BUR5 198 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 ZCCHC2Q9C0B9 1178 aaKnown RBP13.17□□□□□ -0.3
COPS7B-221ENST00000488111 TM7SF3Q9NS93 570 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 EXD2Q9NVH0 621 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 MOSPD1Q9UJG1 213 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 BTRCQ9Y297 605 aa13.17□□□□□ -0.3
COPS7B-221ENST00000488111 NCF1BA6NI72 391 aaPredicted RBP13.16□□□□□ -0.3
COPS7B-221ENST00000488111 CLDN24A6NM45 220 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 NCF1CA8MVU1 366 aaPredicted RBP13.16□□□□□ -0.3
COPS7B-221ENST00000488111 LILRB5O75023 590 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 ZNF217O75362 1048 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 FTH1P02794 183 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 ITGAMP11215 1152 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 NCF1P14598 390 aaPredicted RBP13.16□□□□□ -0.3
COPS7B-221ENST00000488111 DGKAP23743 735 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 PSMB9P28065 219 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 UGT2B10P36537 528 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 TGFBR2P37173 567 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 PREPP48147 710 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 POLR2JP52435 117 aaKnown RBP13.16□□□□□ -0.3
COPS7B-221ENST00000488111 UFM1P61960 85 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 DMWDQ09019 674 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 CDK10Q15131 360 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 FBXO48Q5FWF7 155 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 ATAD3CQ5T2N8 411 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 GDPD3Q7L5L3 318 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 C11orf74Q86VG3 221 aa13.16□□□□□ -0.3
COPS7B-221ENST00000488111 CCDC103Q8IW40 242 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms