RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 ITGAXP20702 1163 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 ZNF10P21506 573 aaPredicted RBP12.11□□□□□ -0.47
PRDM2-208ENST00000487453 DLSTP36957 453 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 SSR2P43308 183 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 ABCE1P61221 599 aaKnown RBP12.11□□□□□ -0.47
PRDM2-208ENST00000487453 BTN3A2P78410 334 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 TGM3Q08188 693 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 STX3Q13277 289 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 CLN3Q13286 438 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 FAM53BQ14153 422 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 TMEM35AQ53FP2 167 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 C10orf62Q5T681 223 aaPredicted RBP12.11□□□□□ -0.47
PRDM2-208ENST00000487453 MLIPQ5VWP3 458 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 CES4AQ5XG92 561 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 ZNF385CQ66K41 422 aaPredicted RBP12.11□□□□□ -0.47
PRDM2-208ENST00000487453 LCN10Q6JVE6 187 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 PDSS2Q86YH6 399 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 TRIM42Q8IWZ5 723 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 UTP15Q8TED0 518 aaKnown RBP12.11□□□□□ -0.47
PRDM2-208ENST00000487453 GPN2Q9H9Y4 310 aaPredicted RBP12.11□□□□□ -0.47
PRDM2-208ENST00000487453 TNFRSF12AQ9NP84 129 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 INTS9Q9NV88 658 aaKnown RBP12.11□□□□□ -0.47
PRDM2-208ENST00000487453 HCN3Q9P1Z3 774 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 SLC12A4Q9UP95 1085 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 RAXQ9Y2V3 346 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 TSC22D4Q9Y3Q8 395 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 WDFY3Q8IZQ1 3526 aa12.11□□□□□ -0.47
PRDM2-208ENST00000487453 LOC101059948A0A1B0GTJ6 334 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 TMEM233B4DJY2 109 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 H0YIG0 161 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 FOXE1O00358 373 aaPredicted RBP12.1□□□□□ -0.47
PRDM2-208ENST00000487453 RTCAO00442 366 aaKnown RBP12.1□□□□□ -0.47
PRDM2-208ENST00000487453 ITM2AO43736 263 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 GALR3O60755 368 aaPredicted RBP12.1□□□□□ -0.47
PRDM2-208ENST00000487453 ULK1O75385 1050 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 ETHE1O95571 254 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 TBX6O95947 436 aaPredicted RBP12.1□□□□□ -0.47
PRDM2-208ENST00000487453 UROSP10746 265 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 PTX3P26022 381 aaPredicted RBP12.1□□□□□ -0.47
PRDM2-208ENST00000487453 SERPINB3P29508 390 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 ARRB2P32121 409 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 SLC1A6P48664 564 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 OLR1P78380 273 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 MAT1AQ00266 395 aaKnown RBP12.1□□□□□ -0.47
PRDM2-208ENST00000487453 GALNT1Q10472 559 aaPredicted RBP12.1□□□□□ -0.47
PRDM2-208ENST00000487453 BST1Q10588 318 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 CSTF3Q12996 717 aaKnown RBP12.1□□□□□ -0.47
PRDM2-208ENST00000487453 DNASE1L3Q13609 305 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 DSG2Q14126 1118 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 ABRAXAS2Q15018 415 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 NCF4Q15080 339 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 IMPG1Q17R60 797 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 SYT16Q17RD7 645 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 ADPRMQ3LIE5 342 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 KANK2Q63ZY3 851 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 ATG16L1Q676U5 607 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 NIPAL1Q6NVV3 410 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 SCIMPQ6UWF3 145 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 FAM198BQ6UWH4 519 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 COX15Q7KZN9 410 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 PROSER1Q86XN7 944 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 SRFBP1Q8NEF9 429 aaKnown RBP12.1□□□□□ -0.47
PRDM2-208ENST00000487453 OR6Y1Q8NGX8 325 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 RAB3IL1Q8TBN0 382 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 KCNC2Q96PR1 638 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 SERPINI1Q99574 410 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 RBCK1Q9BYM8 510 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 AICDAQ9GZX7 198 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 ZNF395Q9H8N7 513 aaPredicted RBP12.1□□□□□ -0.47
PRDM2-208ENST00000487453 TRPC4Q9UBN4 977 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 CTSFQ9UBX1 484 aa12.1□□□□□ -0.47
PRDM2-208ENST00000487453 C21orf140B9A014 251 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 PLPP1O14494 284 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 SKAP2O75563 359 aaPredicted RBP12.09□□□□□ -0.47
PRDM2-208ENST00000487453 CAPNS1P04632 268 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 LIFP15018 202 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 CERS1P27544 350 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 EIF2S3P41091 472 aaKnown RBP12.09□□□□□ -0.47
PRDM2-208ENST00000487453 RPS15P62841 145 aaKnown RBP12.09□□□□□ -0.47
PRDM2-208ENST00000487453 SRSF6Q13247 344 aaKnown RBP12.09□□□□□ -0.47
PRDM2-208ENST00000487453 CUL3Q13618 768 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 AP5B1Q2VPB7 878 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 DEPDC1Q5TB30 811 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 ABHD17CQ6PCB6 329 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 ZNF517Q6ZMY9 492 aaPredicted RBP12.09□□□□□ -0.47
PRDM2-208ENST00000487453 LRRC69Q6ZNQ3 347 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 DDIASQ8IXT1 998 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 AFAP1L2Q8N4X5 818 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 ARFGAP2Q8N6H7 521 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 ZNF781Q8N8C0 355 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 ENDOVQ8N8Q3 282 aaKnown RBP12.09□□□□□ -0.47
PRDM2-208ENST00000487453 AMER3Q8N944 861 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 OR5T3Q8NGG3 340 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 LRRC8CQ8TDW0 803 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 TWIST2Q8WVJ9 160 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 FKBP10Q96AY3 582 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 RGMAQ96B86 450 aa12.09□□□□□ -0.47
PRDM2-208ENST00000487453 SORBS1Q9BX66 1292 aaKnown RBP12.09□□□□□ -0.47
PRDM2-208ENST00000487453 MRPL1Q9BYD6 325 aaKnown RBP12.09□□□□□ -0.47
PRDM2-208ENST00000487453 DPH1Q9BZG8 443 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms