RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 FBXO8Q9NRD0 319 aa16.84■□□□□ 0.29
TNXB-205ENST00000486148 NDUFAF4Q9P032 175 aa16.84■□□□□ 0.29
TNXB-205ENST00000486148 MAFFQ9ULX9 164 aa16.84■□□□□ 0.29
TNXB-205ENST00000486148 PADI2Q9Y2J8 665 aa16.84■□□□□ 0.29
TNXB-205ENST00000486148 PCDHGB3Q9Y5G1 929 aa16.84■□□□□ 0.29
TNXB-205ENST00000486148 LYVE1Q9Y5Y7 322 aa16.84■□□□□ 0.29
TNXB-205ENST00000486148 MKI67P46013 3256 aaKnown RBP16.84■□□□□ 0.29
TNXB-205ENST00000486148 SLC5A10A0PJK1 596 aa16.84■□□□□ 0.29
TNXB-205ENST00000486148 CCL16O15467 120 aa16.84■□□□□ 0.29
TNXB-205ENST00000486148 HOXC11O43248 304 aaPredicted RBP16.84■□□□□ 0.29
TNXB-205ENST00000486148 CATP04040 527 aaKnown RBP16.84■□□□□ 0.29
TNXB-205ENST00000486148 CTSLP07711 333 aa16.84■□□□□ 0.29
TNXB-205ENST00000486148 ETFAP13804 333 aa16.84■□□□□ 0.29
TNXB-205ENST00000486148 TIA1P31483 386 aaKnown RBP eCLIP16.84■□□□□ 0.29
TNXB-205ENST00000486148 TLE2Q04725 743 aa16.84■□□□□ 0.29
TNXB-205ENST00000486148 PRSS36Q5K4E3 855 aa16.84■□□□□ 0.29
TNXB-205ENST00000486148 ANXA8L1Q5VT79 327 aa16.84■□□□□ 0.29
TNXB-205ENST00000486148 IPCEF1Q8WWN9 437 aaPredicted RBP16.84■□□□□ 0.29
TNXB-205ENST00000486148 METTL2AQ96IZ6 378 aaKnown RBP16.84■□□□□ 0.29
TNXB-205ENST00000486148 FEVQ99581 238 aa16.84■□□□□ 0.29
TNXB-205ENST00000486148 KCNK2O95069 426 aa16.83■□□□□ 0.29
TNXB-205ENST00000486148 ENDOUP21128 410 aaKnown RBP16.83■□□□□ 0.29
TNXB-205ENST00000486148 CRATP43155 626 aa16.83■□□□□ 0.29
TNXB-205ENST00000486148 CDC20Q12834 499 aa16.83■□□□□ 0.29
TNXB-205ENST00000486148 TRIM60Q495X7 471 aa16.83■□□□□ 0.29
TNXB-205ENST00000486148 UBE2UQ5VVX9 321 aa16.83■□□□□ 0.29
TNXB-205ENST00000486148 TMPRSS11BQ86T26 416 aa16.83■□□□□ 0.29
TNXB-205ENST00000486148 C11orf65Q8NCR3 313 aa16.83■□□□□ 0.29
TNXB-205ENST00000486148 TCEAL4Q96EI5 215 aa16.83■□□□□ 0.29
TNXB-205ENST00000486148 ZSCAN5AQ9BUG6 496 aa16.83■□□□□ 0.29
TNXB-205ENST00000486148 SLIRPQ9GZT3 109 aaKnown RBP16.83■□□□□ 0.29
TNXB-205ENST00000486148 AMBNQ9NP70 447 aa16.83■□□□□ 0.29
TNXB-205ENST00000486148 PRDM8Q9NQV8 689 aa16.83■□□□□ 0.29
TNXB-205ENST00000486148 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.83■□□□□ 0.29
TNXB-205ENST00000486148 RLIMQ9NVW2 624 aa16.83■□□□□ 0.29
TNXB-205ENST00000486148 CORO2BQ9UQ03 480 aa16.83■□□□□ 0.29
TNXB-205ENST00000486148 SH2B3Q9UQQ2 575 aa16.83■□□□□ 0.29
TNXB-205ENST00000486148 ZBBXA8MT70 800 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 TNFRSF11BO00300 401 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 MRPS14O60783 128 aaKnown RBP16.83■□□□□ 0.28
TNXB-205ENST00000486148 HLA-EP13747 358 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 TYRP14679 529 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 ZNF8P17098 575 aaPredicted RBP16.83■□□□□ 0.28
TNXB-205ENST00000486148 PPIBP23284 216 aaKnown RBP16.83■□□□□ 0.28
TNXB-205ENST00000486148 CD40LGP29965 261 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 C21orf33P30042 268 aaPredicted RBP16.83■□□□□ 0.28
TNXB-205ENST00000486148 OR1E2P47887 323 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 COPZ1P61923 177 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 SELENOWP63302 87 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 HBA1P69905 142 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 HIST2H2ACQ16777 129 aaPredicted RBP16.83■□□□□ 0.28
TNXB-205ENST00000486148 SYT16Q17RD7 645 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 SPIN4Q56A73 249 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 SLCO4C1Q6ZQN7 724 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 LINC00299Q6ZSB3 139 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 ANKRD33Q7Z3H0 272 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 HEATR4Q86WZ0 1026 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 KLHDC8AQ8IYD2 350 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 OR52J3Q8NH60 311 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 PHF10Q8WUB8 498 aaKnown RBP16.83■□□□□ 0.28
TNXB-205ENST00000486148 PROX1Q92786 737 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 FAM83CQ9BQN1 747 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 SNPHO15079 494 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 ATG13O75143 517 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 RFPL2O75678 378 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 LIPAP38571 399 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 SERPINB10P48595 397 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 PCDH1Q08174 1060 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 P3H2Q8IVL5 708 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 IQCF2Q8IXL9 164 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 REM2Q8IYK8 340 aaPredicted RBP16.83■□□□□ 0.28
TNXB-205ENST00000486148 SLC5A8Q8N695 610 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 GLYATL1Q969I3 302 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 TIFAQ96CG3 184 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 COPS4Q9BT78 406 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 ASAH2Q9NR71 780 aa16.83■□□□□ 0.28
TNXB-205ENST00000486148 ZNF282Q9UDV7 671 aaPredicted RBP16.83■□□□□ 0.28
TNXB-205ENST00000486148 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.83■□□□□ 0.28
TNXB-205ENST00000486148 PCM1Q15154 2024 aa16.82■□□□□ 0.28
TNXB-205ENST00000486148 HELZP42694 1942 aaKnown RBP16.82■□□□□ 0.28
TNXB-205ENST00000486148 PRAMEF25A6NGN4 478 aa16.82■□□□□ 0.28
TNXB-205ENST00000486148 SAP18O00422 153 aaKnown RBP16.82■□□□□ 0.28
TNXB-205ENST00000486148 RNASET2O00584 256 aaKnown RBP16.82■□□□□ 0.28
TNXB-205ENST00000486148 SPNP16150 400 aa16.82■□□□□ 0.28
TNXB-205ENST00000486148 POLR2EP19388 210 aaKnown RBP16.82■□□□□ 0.28
TNXB-205ENST00000486148 SLC19A1P41440 591 aa16.82■□□□□ 0.28
TNXB-205ENST00000486148 PRLHRP49683 370 aa16.82■□□□□ 0.28
TNXB-205ENST00000486148 MC1RQ01726 317 aa16.82■□□□□ 0.28
TNXB-205ENST00000486148 TMEM115Q12893 351 aaPredicted RBP16.82■□□□□ 0.28
TNXB-205ENST00000486148 PPIGQ13427 754 aaKnown RBP eCLIP16.82■□□□□ 0.28
TNXB-205ENST00000486148 ZNF284Q2VY69 593 aa16.82■□□□□ 0.28
TNXB-205ENST00000486148 CCDC58Q4VC31 144 aa16.82■□□□□ 0.28
TNXB-205ENST00000486148 LILRA6Q6PI73 481 aa16.82■□□□□ 0.28
TNXB-205ENST00000486148 TMEM220Q6QAJ8 160 aa16.82■□□□□ 0.28
TNXB-205ENST00000486148 RFPL4BQ6ZWI9 263 aa16.82■□□□□ 0.28
TNXB-205ENST00000486148 TECPR1Q7Z6L1 1165 aa16.82■□□□□ 0.28
TNXB-205ENST00000486148 CCDC103Q8IW40 242 aa16.82■□□□□ 0.28
TNXB-205ENST00000486148 PEX5LQ8IYB4 626 aa16.82■□□□□ 0.28
TNXB-205ENST00000486148 IRF7Q92985 503 aa16.82■□□□□ 0.28
TNXB-205ENST00000486148 CCM2Q9BSQ5 444 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms