RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 DSG2Q14126 1118 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 NCF4Q15080 339 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 ZRSR2Q15696 482 aaKnown RBP7.86□□□□□ -1.15
SF3A1-208ENST00000485618 HKDC1Q2TB90 917 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 CRTC2Q53ET0 693 aaPredicted RBP7.86□□□□□ -1.15
SF3A1-208ENST00000485618 UNC50Q53HI1 259 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 TNFAIP8L3Q5GJ75 292 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 TOR1AIP1Q5JTV8 583 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 FRG2Q64ET8 278 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 ATG16L1Q676U5 607 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 FRMD7Q6ZUT3 714 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 PAGE2Q7Z2X7 111 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 SYVN1Q86TM6 617 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.86□□□□□ -1.15
SF3A1-208ENST00000485618 ZNF740Q8NDX6 193 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 OR2L5Q8NG80 312 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 HUS1BQ8NHY5 278 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 ADAMTS18Q8TE60 1221 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 MIEF2Q96C03 454 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 ATP6V1G3Q96LB4 118 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 CATSPER2Q96P56 530 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 FRG2BQ96QU4 278 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 SLC6A16Q9GZN6 736 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 CHST8Q9H2A9 424 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 BRF2Q9HAW0 419 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 MID1IP1Q9NPA3 183 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 DHCR7Q9UBM7 475 aaKnown RBP7.86□□□□□ -1.15
SF3A1-208ENST00000485618 TRPC4Q9UBN4 977 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 CROTQ9UKG9 612 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 ZNF490Q9ULM2 529 aaPredicted RBP7.86□□□□□ -1.15
SF3A1-208ENST00000485618 PPT2Q9UMR5 302 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 SH2B3Q9UQQ2 575 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 MRPS33Q9Y291 106 aaKnown RBP7.86□□□□□ -1.15
SF3A1-208ENST00000485618 MAP4K5Q9Y4K4 846 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 PCDHGA6Q9Y5G7 932 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 PTPRQQ9UMZ3 2332 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 SNRNP200O75643 2136 aaKnown RBP7.85□□□□□ -1.15
SF3A1-208ENST00000485618 A0A0A6YYC8 382 aaPredicted RBP7.85□□□□□ -1.15
SF3A1-208ENST00000485618 TMEM120BA0PK00 339 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 TMEM114B3SHH9 223 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 PYCARD-AS1I3L0S3 204 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 I3L1I5 382 aaPredicted RBP7.85□□□□□ -1.15
SF3A1-208ENST00000485618 CLDN4O14493 209 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 ERI3O43414 337 aaKnown RBP7.85□□□□□ -1.15
SF3A1-208ENST00000485618 KLHL41O60662 606 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 KLHL18O94889 574 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 TIAF1O95411 115 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 SBK3P0C264 359 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 UROSP10746 265 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 EPORP19235 508 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 JAK1P23458 1154 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 FOLR3P41439 243 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 OR1D4P47884 311 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 AP2B1P63010 937 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 BTN3A2P78410 334 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 VAC14Q08AM6 782 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 LY6DQ14210 128 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 SSPNQ14714 243 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 IMPG1Q17R60 797 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 DEPDC1Q5TB30 811 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 KHDRBS2Q5VWX1 349 aaKnown RBP7.85□□□□□ -1.15
SF3A1-208ENST00000485618 CYP20A1Q6UW02 462 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 ZNF517Q6ZMY9 492 aaPredicted RBP7.85□□□□□ -1.15
SF3A1-208ENST00000485618 TIPARPQ7Z3E1 657 aaKnown RBP7.85□□□□□ -1.15
SF3A1-208ENST00000485618 VN1R4Q7Z5H5 301 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 RAB43Q86YS6 212 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 ARFGAP2Q8N6H7 521 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 CDYL2Q8N8U2 506 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 ANKRD42Q8N9B4 389 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 ANKRD53Q8N9V6 530 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 KCT2Q8NC54 265 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 OR4F6Q8NGB9 312 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 OR52B6Q8NGF0 335 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 OR2Y1Q8NGV0 311 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 RAB3IL1Q8TBN0 382 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 CREB3L4Q8TEY5 395 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 ZNF473Q8WTR7 871 aaKnown RBP7.85□□□□□ -1.15
SF3A1-208ENST00000485618 CT55Q8WUE5 264 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 DYDC1Q8WWB3 177 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 SELENOMQ8WWX9 145 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 METTL21AQ8WXB1 218 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 THAP4Q8WY91 577 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 PMEPA1Q969W9 287 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 TLCD1Q96CP7 247 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 WBP1Q96G27 269 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 METTL2AQ96IZ6 378 aaKnown RBP7.85□□□□□ -1.15
SF3A1-208ENST00000485618 SLC45A3Q96JT2 553 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 OR1F2PQ96R84 312 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 SERINC2Q96SA4 455 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 SEMA4CQ9C0C4 833 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 ILKAPQ9H0C8 392 aaPredicted RBP7.85□□□□□ -1.15
SF3A1-208ENST00000485618 SLC26A1Q9H2B4 701 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 WDR41Q9HAD4 459 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 MED4Q9NPJ6 270 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 SEMA3GQ9NS98 782 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 MS4A12Q9NXJ0 267 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 SLC17A7Q9P2U7 560 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 G3BP2Q9UN86 482 aaKnown RBP7.85□□□□□ -1.15
SF3A1-208ENST00000485618 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.85□□□□□ -1.15
SF3A1-208ENST00000485618 RNF11Q9Y3C5 154 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms