RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 MMD2Q8IY49 270 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 KIRREL3Q8IZU9 778 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 RYBPQ8N488 228 aaPredicted RBP3.21□□□□□ -1.9
COPA-204ENST00000481522 RAB42Q8N4Z0 105 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 PI4KAP1Q8N8J0 262 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 MRPS27Q92552 414 aaKnown RBP3.21□□□□□ -1.9
COPA-204ENST00000481522 BADQ92934 168 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 GMPPAQ96IJ6 420 aaPredicted RBP3.21□□□□□ -1.9
COPA-204ENST00000481522 PRAC1Q96KF2 57 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 LRRC3BQ96PB8 259 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 FEVQ99581 238 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 CPNE1Q99829 537 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 PRRG4Q9BZD6 226 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 MTMR12Q9C0I1 747 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 EGLN1Q9GZT9 426 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 P2RY12Q9H244 342 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 CDH20Q9HBT6 801 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 CHST11Q9NPF2 352 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 ATAD3AQ9NVI7 634 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 CACNG5Q9UF02 275 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 DCHS2Q6V1P9 2916 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 COL4A1P02462 1669 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 ZANQ9Y493 2812 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 A8MXE2 369 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 EPHB6O15197 1021 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 TBX10O75333 385 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 ACSL3O95573 720 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 ZNF26P17031 533 aaPredicted RBP3.2□□□□□ -1.9
COPA-204ENST00000481522 CEBPBP17676 345 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 CD22P20273 847 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 CLK1P49759 484 aaKnown RBP3.2□□□□□ -1.9
COPA-204ENST00000481522 BMXP51813 675 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 IRX1P78414 480 aaPredicted RBP3.2□□□□□ -1.9
COPA-204ENST00000481522 ACSM1Q08AH1 577 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 HNRNPDQ14103 355 aaKnown RBP3.2□□□□□ -1.9
COPA-204ENST00000481522 SQLEQ14534 574 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 TMEM187Q14656 261 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 HERC3Q15034 1050 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 KRBOX4Q5JUW0 171 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 PWWP2BQ6NUJ5 590 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 OLFM4Q6UX06 510 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 LGI2Q8N0V4 545 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 NDUFAF2Q8N183 169 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 OR4K1Q8NGD4 311 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 PIGBQ92521 554 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 VPS33AQ96AX1 596 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 SPSB1Q96BD6 273 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 ERP27Q96DN0 273 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 OTUB1Q96FW1 271 aaPredicted RBP3.2□□□□□ -1.9
COPA-204ENST00000481522 ZNF558Q96NG5 402 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 SERINC2Q96SA4 455 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 TRIM51Q9BSJ1 452 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 SLC25A23Q9BV35 468 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 FAM49AQ9H0Q0 323 aaPredicted RBP3.2□□□□□ -1.9
COPA-204ENST00000481522 CCDC177Q9NQR7 707 aaPredicted RBP3.2□□□□□ -1.9
COPA-204ENST00000481522 OR6C2Q9NZP2 312 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 TBC1D7Q9P0N9 293 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 C5AR2Q9P296 337 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 NFKBIL1Q9UBC1 381 aaPredicted RBP3.2□□□□□ -1.9
COPA-204ENST00000481522 CFDP1Q9UEE9 299 aaPredicted RBP3.2□□□□□ -1.9
COPA-204ENST00000481522 C19orf25Q9UFG5 118 aaPredicted RBP3.2□□□□□ -1.9
COPA-204ENST00000481522 TNNQ9UQP3 1299 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 CCL27Q9Y4X3 112 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 APCP25054 2843 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 TSC2P49815 1807 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 PLEKHH1Q9ULM0 1364 aa3.2□□□□□ -1.9
COPA-204ENST00000481522 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 O00370 1275 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 SLC30A4O14863 429 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 TIMM44O43615 452 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 GLRA3O75311 464 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 ZNF821O75541 412 aaPredicted RBP3.19□□□□□ -1.9
COPA-204ENST00000481522 CCDC175P0C221 793 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 OR52Z1P0C646 297 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 CYP11B2P19099 503 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 HSPA4P34932 840 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 CSRP3P50461 194 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 RAD23AP54725 363 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 POLR2LP62875 67 aaKnown RBP3.19□□□□□ -1.9
COPA-204ENST00000481522 PPARDQ03181 441 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 CAMK2DQ13557 499 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 COG2Q14746 738 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 SGSM1Q2NKQ1 1148 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 XKR6Q5GH73 641 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 SLC25A53Q5H9E4 307 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 ADAMTSL4-AS1Q5T5F5 129 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 LCN1P1Q5VSP4 162 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 BHLHB9Q6PI77 547 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 Q6ZSR9 355 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 G2E3Q7L622 706 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 CCDC186Q7Z3E2 898 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 TLK2Q86UE8 772 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 BMPERQ8N8U9 685 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 CAMKVQ8NCB2 501 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 DBF4BQ8NFT6 615 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 OR5AP2Q8NGF4 316 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 OR2T6Q8NHC8 308 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 MAGED4Q96JG8 741 aa3.19□□□□□ -1.9
COPA-204ENST00000481522 FAM71F1Q96KD3 344 aaPredicted RBP3.19□□□□□ -1.9
COPA-204ENST00000481522 ZNF599Q96NL3 588 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms