RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 ZNF821O75541 412 aaPredicted RBP4.85□□□□□ -1.63
COPA-203ENST00000481040 TOM1L1O75674 476 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 SYNGR4O95473 234 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 CPNE6O95741 557 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 EPOP01588 193 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 SERPINF2P08697 491 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 CTAGE8P0CG41 777 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 HNRNPCL4P0DMR1 293 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 SFTPCP11686 197 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 ODC1P11926 461 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 GP1BBP13224 206 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 ITGB6P18564 788 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 TNNI3P19429 210 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 DRD5P21918 477 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 FCARP24071 287 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 GJB2P29033 226 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 MAZP56270 477 aaKnown RBP4.85□□□□□ -1.63
COPA-203ENST00000481040 MYBPC1Q00872 1141 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 COL10A1Q03692 680 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 FUT7Q11130 342 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 NFATC4Q14934 902 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 SLC36A3Q495N2 470 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 GPR33Q49SQ1 333 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 SLC35D3Q5M8T2 416 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 BNIPLQ7Z465 357 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 COX8CQ7Z4L0 72 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 CPEB2Q7Z5Q1 589 aaKnown RBP4.85□□□□□ -1.63
COPA-203ENST00000481040 SATL1Q86VE3 508 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 CTAGE4Q8IX94 777 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 RCOR2Q8IZ40 523 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 CLIP4Q8N3C7 705 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 NANOGP1Q8N7R0 232 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 RNF149Q8NC42 400 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 OR52N5Q8NH56 324 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 RNF139Q8WU17 664 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 HSD17B8Q92506 261 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 THOC3Q96J01 351 aaKnown RBP4.85□□□□□ -1.63
COPA-203ENST00000481040 ZNF583Q96ND8 569 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 LAT2Q9GZY6 243 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 NACA2Q9H009 215 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 GANQ9H2C0 597 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 DPEP2Q9H4A9 486 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 VPS37BQ9H9H4 285 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 UBTD1Q9HAC8 227 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 FGF21Q9NSA1 209 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 TEKT2Q9UIF3 430 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 CHMP2BQ9UQN3 213 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 DDX49Q9Y6V7 483 aaKnown RBP4.85□□□□□ -1.63
COPA-203ENST00000481040 NPC1L1Q9UHC9 1359 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 RAD54L2Q9Y4B4 1467 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 SYNRGQ9UMZ2 1314 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 A0A1W2PN81 502 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 ANKRD30BLA7E2S9 258 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 CHEK1O14757 476 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 CSDE1O75534 798 aaKnown RBP4.84□□□□□ -1.63
COPA-203ENST00000481040 PMS2P2O95744 297 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 YES1P07947 543 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 RRASP10301 218 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 CLUP10909 449 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 ANPEPP15144 967 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 PAICSP22234 425 aaKnown RBP4.84□□□□□ -1.63
COPA-203ENST00000481040 CA4P22748 312 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 IL4RP24394 825 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 PTPN4P29074 926 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 PRDX2P32119 198 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 OTX2P32243 289 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 OR1D2P34982 312 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 CHRNA7P36544 502 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 PEX19P40855 299 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 PTGER3P43115 390 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 NLRP11P59045 1033 aaKnown RBP4.84□□□□□ -1.63
COPA-203ENST00000481040 UBE2HP62256 183 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 MRPL28Q13084 256 aaKnown RBP4.84□□□□□ -1.63
COPA-203ENST00000481040 RFTN1Q14699 578 aaPredicted RBP4.84□□□□□ -1.63
COPA-203ENST00000481040 SPHARQ15513 63 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 ADPRMQ3LIE5 342 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 CCDC152Q4G0S7 254 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 AGKQ53H12 422 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 ARHGEF16Q5VV41 709 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 COLCA1Q6ZS62 124 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.84□□□□□ -1.63
COPA-203ENST00000481040 GRAMD2AQ8IUY3 354 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 ZDHHC21Q8IVQ6 265 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 MAPKAPK5-AS1Q8N8E1 139 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 STKLD1Q8NE28 680 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 GPRC5AQ8NFJ5 357 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 CHPT1Q8WUD6 406 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 NCLNQ969V3 563 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 RAB39BQ96DA2 213 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 MRPL53Q96EL3 112 aaKnown RBP4.84□□□□□ -1.63
COPA-203ENST00000481040 RPGRIP1Q96KN7 1286 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 C17orf77Q96MU5 243 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 BTBD9Q96Q07 612 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 CBWD1Q9BRT8 395 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 UBAC1Q9BSL1 405 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 MTMR12Q9C0I1 747 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 TM9SF3Q9HD45 589 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 HPS4Q9NQG7 708 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 SDR39U1Q9NRG7 319 aaPredicted RBP4.84□□□□□ -1.63
COPA-203ENST00000481040 HIF1ANQ9NWT6 349 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms