RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 CTU1Q7Z7A3 348 aaKnown RBP20.44■□□□□ 0.86
SDF4-206ENST00000478938 DDX53Q86TM3 631 aaKnown RBP20.44■□□□□ 0.86
SDF4-206ENST00000478938 SERPINB11Q96P15 392 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 MRIQ9BWK5 157 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 SLC29A3Q9BZD2 475 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 SESN1Q9Y6P5 492 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 TCRBV16S1A1N1A0A5B0 115 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 HK1P19367 917 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 STOMP27105 288 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 SDC2P34741 201 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 PIK3CGP48736 1102 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 STAT5BP51692 787 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 VSX2P58304 361 aaPredicted RBP20.44■□□□□ 0.86
SDF4-206ENST00000478938 FAM189BP81408 668 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 CACNB2Q08289 660 aaPredicted RBP20.44■□□□□ 0.86
SDF4-206ENST00000478938 C18orf21Q32NC0 220 aaPredicted RBP20.44■□□□□ 0.86
SDF4-206ENST00000478938 OVOS1Q6IE37 1185 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 KANSL1Q7Z3B3 1105 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 LUZP2Q86TE4 346 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 ZIC5Q96T25 663 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 NIPSNAP1Q9BPW8 284 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 KATNAL1Q9BW62 490 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 TXNL4BQ9NX01 149 aaKnown RBP20.44■□□□□ 0.86
SDF4-206ENST00000478938 FBXW11Q9UKB1 542 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 LSM2Q9Y333 95 aaKnown RBP20.44■□□□□ 0.86
SDF4-206ENST00000478938 PCDHGB7Q9Y5F8 929 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 PCDHGB3Q9Y5G1 929 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 NUP214P35658 2090 aaPredicted RBP20.44■□□□□ 0.86
SDF4-206ENST00000478938 BEST1O76090 585 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 HK3P52790 923 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 ZNF704Q6ZNC4 412 aaPredicted RBP20.43■□□□□ 0.86
SDF4-206ENST00000478938 GDPGP1Q6ZNW5 385 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 AHCYL2Q96HN2 611 aaKnown RBP20.43■□□□□ 0.86
SDF4-206ENST00000478938 TMEM175Q9BSA9 504 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 DDIT4Q9NX09 232 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 SH3BP4Q9P0V3 963 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 GLS2Q9UI32 602 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 TRAV6A0A075B6T7 132 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 HPGDSO60760 199 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 CBX7O95931 251 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 LGI1O95970 557 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 SUOXP51687 545 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 SCAPQ12770 1279 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 TMEM132CQ8N3T6 1108 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 SYT14Q8NB59 555 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 OR52J3Q8NH60 311 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 FOXJ1Q92949 421 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 NTAN1Q96AB6 310 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 COQ10AQ96MF6 247 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 ZNF382Q96SR6 550 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 COA4Q9NYJ1 87 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 HCN3Q9P1Z3 774 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 SCN9AQ15858 1988 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 SBF1O95248 1867 aa20.43■□□□□ 0.86
SDF4-206ENST00000478938 CLDN5O00501 218 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 WNT9AO14904 365 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 TPST2O60704 377 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 IL6P05231 212 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 HAPLN1P10915 354 aaPredicted RBP20.42■□□□□ 0.86
SDF4-206ENST00000478938 SMPD1P17405 629 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 HMGCS1Q01581 520 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 ABHD18Q0P651 414 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 UGT8Q16880 541 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 MICAQ29983 383 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 HSDL2Q6YN16 418 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 CLDN22Q8N7P3 220 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 KCT2Q8NC54 265 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 NXPE2Q96DL1 559 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 PELOQ9BRX2 385 aaKnown RBP20.42■□□□□ 0.86
SDF4-206ENST00000478938 SERHLQ9NQF3 203 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 ZMYM5Q9UJ78 669 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 PARP14Q460N5 1801 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 RHOBTB1O94844 696 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 CCNB2O95067 398 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 IL1AP01583 271 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 RPL17P18621 184 aaKnown RBP20.42■□□□□ 0.86
SDF4-206ENST00000478938 CSTF1Q05048 431 aaKnown RBP20.42■□□□□ 0.86
SDF4-206ENST00000478938 SPHARQ15513 63 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 SAMD11Q96NU1 681 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 EPYCQ99645 322 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 NDUFB11Q9NX14 153 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 KIF25Q9UIL4 384 aa20.42■□□□□ 0.86
SDF4-206ENST00000478938 EXO1Q9UQ84 846 aaKnown RBP20.42■□□□□ 0.86
SDF4-206ENST00000478938 IGKV6D-21A0A0A0MT36 114 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 M0R233 179 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 DNASE2O00115 360 aaPredicted RBP20.41■□□□□ 0.86
SDF4-206ENST00000478938 MMP20O60882 483 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 POU2F1P14859 743 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 BAG6P46379 1132 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 DGKEP52429 567 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 IQCCQ4KMZ1 466 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 SUSD1Q6UWL2 747 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 UNC93AQ86WB7 457 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 SMG7Q92540 1137 aaKnown RBP20.41■□□□□ 0.86
SDF4-206ENST00000478938 MTFMTQ96DP5 389 aaKnown RBP20.41■□□□□ 0.86
SDF4-206ENST00000478938 RPRD1AQ96P16 312 aaPredicted RBP20.41■□□□□ 0.86
SDF4-206ENST00000478938 SLC2A13Q96QE2 648 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 KCNJ15Q99712 375 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 C1QTNF3Q9BXJ4 246 aa20.41■□□□□ 0.86
SDF4-206ENST00000478938 DERL2Q9GZP9 239 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms