RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 H7C423 109 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 PPIP5K2O43314 1243 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 DCXO43602 365 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 SIX3O95343 332 aaPredicted RBP3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 IFNB1P01574 187 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 C9P02748 559 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 FAM58BPP0C7Q3 252 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 PRKACGP22612 351 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 AADACP22760 399 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 CDX1P47902 265 aaPredicted RBP3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 GMPSP49915 693 aaPredicted RBP3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 DCDC1P59894 354 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 IL10RBQ08334 325 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 NPRL3Q12980 569 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 TAB1Q15750 504 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 TAZQ16635 292 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 CDO1Q16878 200 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 TWISTNBQ3B726 338 aaPredicted RBP3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 MAJINQ3KP22 176 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 ANKRD20A4Q4UJ75 823 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 FASTKD1Q53R41 847 aaKnown RBP3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 ANKRD20A8PQ5CZ79 823 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 ANKRD20A2Q5SQ80 823 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 ANKRD20A1Q5TYW2 823 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 ANKRD20A3Q5VUR7 823 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 FAM166AQ6J272 317 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 OLFM4Q6UX06 510 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 MSANTD1Q6ZTZ1 278 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 CHMP1BQ7LBR1 199 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 ANKRD33Q7Z3H0 272 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 TMEM110Q86TL2 294 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 LRRTM1Q86UE6 522 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 APCDD1Q8J025 514 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 CNNM3Q8NE01 707 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 MOCOSQ96EN8 888 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 ERO1AQ96HE7 468 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 CNDP1Q96KN2 507 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 CFAP53Q96M91 514 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 AGAP3Q96P47 875 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 ZNF300Q96RE9 604 aaPredicted RBP3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 INTS14Q96SY0 518 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 MLPHQ9BV36 600 aaPredicted RBP3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 TRIM7Q9C029 511 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 WWTR1Q9GZV5 400 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 NT5C3AQ9H0P0 336 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 EGLN3Q9H6Z9 239 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 MED20Q9H944 212 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 ABCB8Q9NUT2 735 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 PANK4Q9NVE7 773 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 TBC1D13Q9NVG8 400 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 CNIH4Q9P003 139 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 SLC12A6Q9UHW9 1150 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 HPCAL4Q9UM19 191 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 EXOC7Q9UPT5 735 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 RUVBL2Q9Y230 463 aaKnown RBP3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 PRSS21Q9Y6M0 314 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 CSNK1G3Q9Y6M4 447 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 HEG1Q9ULI3 1381 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 SNED1Q8TER0 1413 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 A0A0J9YWU9 116 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 RNF103-CHMP3A0A140T963 221 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 SMIM30A4D0T7 59 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 TMEM150CB9EJG8 249 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 RNF103O00237 685 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 FLRT2O43155 660 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 RIPK2O43353 540 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 NOL3O60936 208 aaKnown RBP3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 FCGR3BO75015 233 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 YES1P07947 543 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 ZFYP08048 801 aaPredicted RBP3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 ZSCAN5DPP0CG00 497 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 IL4RP24394 825 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 PRPHP41219 470 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 SOX3P41225 446 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 ATXN3P54252 364 aaPredicted RBP3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 CASP9P55211 416 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 PTENP60484 403 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 MRPL28Q13084 256 aaKnown RBP3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 IFT88Q13099 833 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 TRA2AQ13595 282 aaKnown RBP eCLIP3.35□□□□□ -1.876e-6■■■■□ 20.3
SMARCA1-204ENST00000478420 MTF1Q14872 753 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 PDK1Q15118 436 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 NECTIN1Q15223 517 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 MTHFSDQ2M296 383 aaKnown RBP3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 CEP55Q53EZ4 464 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 ZNF772Q68DY9 489 aaPredicted RBP3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 TXNRD3NBQ6F5E7 133 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 OR4C11Q6IEV9 310 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 ZNF613Q6PF04 617 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 PRSS55Q6UWB4 352 aaPredicted RBP3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 TMEM182Q6ZP80 229 aaPredicted RBP3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 STXBP4Q6ZWJ1 553 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 CPEB2Q7Z5Q1 589 aaKnown RBP3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 HOOK3Q86VS8 718 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 C4orf19Q8IY42 314 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 PRSS35Q8N3Z0 413 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 TCEANCQ8N8B7 351 aa3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 MRPL43Q8N983 215 aaKnown RBP3.35□□□□□ -1.87
SMARCA1-204ENST00000478420 ATAD1Q8NBU5 361 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms