RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 RAD1O60671 282 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 DPM1O60762 260 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 SNAPC5O75971 98 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 CTDNEP1O95476 244 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 TDP2O95551 362 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 HOXC4P09017 264 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 DLDP09622 509 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 PFKLP17858 780 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 XRCC1P18887 633 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 HNF1AP20823 631 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 TGM2P21980 687 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 IGFBP5P24593 272 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ATP5A1P25705 553 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 CD6P30203 668 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 HOXA9P31269 272 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 FEN1P39748 380 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 TECP42680 631 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ETV4P43268 484 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 KCNC1P48547 511 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 DHPSP49366 369 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 RBP2P50120 134 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 CDH15P55291 814 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 CD81P60033 236 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 YWHAZP63104 245 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ARF5P84085 180 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 SLC18A2Q05940 514 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 SLC14A1Q13336 389 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ILKQ13418 452 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 PEX6Q13608 980 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 PMS2P11Q13670 270 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 USP10Q14694 798 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 SLC18A3Q16572 532 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 SYT16Q17RD7 645 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ASTE1Q2TB18 679 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 SLC9B1Q4ZJI4 515 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 SGO1Q5FBB7 561 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 PAGE2BQ5JRK9 111 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ZNF484Q5JVG2 852 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ARCQ7LC44 396 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ADGRD2Q7Z7M1 963 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 CHSY1Q86X52 802 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 RASAL3Q86YV0 1011 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ARID3BQ8IVW6 561 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 CCDC105Q8IYK2 499 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 MCOLN2Q8IZK6 566 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 C8orf59Q8N0T1 100 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 OR8H3Q8N146 312 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ZNF786Q8N393 782 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 LRRC17Q8N6Y2 441 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 GDPD1Q8N9F7 314 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 FAM47BQ8NA70 645 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ADPRHL1Q8NDY3 354 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 AGBL3Q8NEM8 1001 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 CREB3L4Q8TEY5 395 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 DCAKDQ8WVC6 231 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 NARS2Q96I59 477 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 SERAC1Q96JX3 654 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 FAM84AQ96KN4 292 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ZNF778Q96MU6 729 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 CASD1Q96PB1 797 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ADI1Q9BV57 179 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ADGRE3Q9BY15 652 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 NMUR2Q9GZQ4 415 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 HDHD2Q9H0R4 259 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 MIXL1Q9H2W2 232 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 MTG2Q9H4K7 406 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ASB8Q9H765 288 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 DDX31Q9H8H2 851 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 SEPSECSQ9HD40 501 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 XPNPEP1Q9NQW7 623 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 POLE4Q9NR33 117 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 FAM120CQ9NX05 1096 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 LYARQ9NX58 379 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 GRHL1Q9NZI5 618 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 COL20A1Q9P218 1284 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ARHGAP20Q9P2F6 1191 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 XPR1Q9UBH6 696 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ARPP21Q9UBL0 812 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 UBQLN2Q9UHD9 624 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 SSR3Q9UNL2 185 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 PCDHB7Q9Y5E2 793 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 SRPRBQ9Y5M8 271 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 SNX11Q9Y5W9 270 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 NHSQ6T4R5 1651 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 COL18A1P39060 1754 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 MYH6P13533 1939 aa5.76□□□□□ -1.49
ECHDC1-215ENST00000475319 TMEM265A0A087WTH1 108 aa5.76□□□□□ -1.49
ECHDC1-215ENST00000475319 A0A1B0GTW7 788 aa5.76□□□□□ -1.49
ECHDC1-215ENST00000475319 A0A1W2PN81 502 aa5.76□□□□□ -1.49
ECHDC1-215ENST00000475319 IQCF5A8MTL0 148 aa5.76□□□□□ -1.49
ECHDC1-215ENST00000475319 FOXO6A8MYZ6 492 aa5.76□□□□□ -1.49
ECHDC1-215ENST00000475319 POC1B-GALNT4F8VUJ3 575 aa5.76□□□□□ -1.49
ECHDC1-215ENST00000475319 H7C4K7 107 aa5.76□□□□□ -1.49
ECHDC1-215ENST00000475319 DNASE2O00115 360 aaPredicted RBP5.76□□□□□ -1.49
ECHDC1-215ENST00000475319 POLRMTO00411 1230 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-215ENST00000475319 NFIBO00712 420 aa5.76□□□□□ -1.49
ECHDC1-215ENST00000475319 ADAMTS3O15072 1205 aa5.76□□□□□ -1.49
ECHDC1-215ENST00000475319 LDLRAD4O15165 306 aa5.76□□□□□ -1.49
ECHDC1-215ENST00000475319 PGRMC2O15173 223 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms