RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 OAS1P00973 400 aaKnown RBP10.6□□□□□ -0.71
VAPB-204ENST00000475243 FHP07954 510 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 CHRM1P11229 460 aaPredicted RBP10.6□□□□□ -0.71
VAPB-204ENST00000475243 GPX6P59796 221 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 MEP1AQ16819 746 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 FLYWCH1Q4VC44 716 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 MR1Q95460 341 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 BORCS8Q96FH0 119 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 KLHDC7BQ96G42 594 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 HSH2DQ96JZ2 352 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 B3GAT2Q9NPZ5 323 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 CYP17A1P05093 508 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 PGGT1BP53609 377 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 EEFSECP57772 596 aaKnown RBP10.6□□□□□ -0.71
VAPB-204ENST00000475243 PON3Q15166 354 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 ZNF542PQ5EBM4 170 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 ADGRD2Q7Z7M1 963 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 SLITRK4Q8IW52 837 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 MAF1Q9H063 256 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 PRDM4Q9UKN5 801 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 WDR45Q9Y484 360 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 FEZF1A0PJY2 475 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 ABLIM1O14639 778 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 ZNF30P17039 623 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 KCTD9Q7L273 389 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 TOMM5Q8N4H5 51 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 TCEANCQ8N8B7 351 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 ZNF565Q8N9K5 539 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 DENND6BQ8NEG7 585 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 TCRBV21S2A2A0A5A6 115 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 NFKBIEO00221 500 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 SLC22A2O15244 555 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 APOL3O95236 402 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 CLIC3O95833 236 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 OR12D1P0DN82 309 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 SRCP12931 536 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 SLC22A4Q9H015 551 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 NKX1-2Q9UD57 310 aaPredicted RBP10.6□□□□□ -0.71
VAPB-204ENST00000475243 CFL2Q9Y281 166 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 GABRA3P34903 492 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 ADAM15Q13444 863 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 C1orf61Q13536 156 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 DSG2Q14126 1118 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 MAD2L1BPQ15013 274 aaPredicted RBP10.6□□□□□ -0.71
VAPB-204ENST00000475243 PAFAH1B3Q15102 231 aaKnown RBP10.6□□□□□ -0.71
VAPB-204ENST00000475243 IGDCC3Q8IVU1 814 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 C12orf76Q8N812 135 aaPredicted RBP10.6□□□□□ -0.71
VAPB-204ENST00000475243 MFSD2AQ8NA29 543 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 ZNF461Q8TAF7 563 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 GPR22Q99680 433 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 ZNF226Q9NYT6 803 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 PCDHB3Q9Y5E6 796 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 PCDHGB1Q9Y5G3 927 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 FXYD6-FXYD2A0A087WZ82 144 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 KANTRA0A1W2PQU2 76 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 KLF8O95600 359 aaPredicted RBP10.6□□□□□ -0.71
VAPB-204ENST00000475243 CDH11P55287 796 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 BNIP3Q12983 259 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 SERINC3Q13530 473 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 NPY5RQ15761 445 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 CYBRD1Q53TN4 286 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 ALG10Q5BKT4 473 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 TPRG1LQ5T0D9 272 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 C12orf40Q86WS4 652 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 NPAS3Q8IXF0 933 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 NLGN4XQ8N0W4 816 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 SLC7A6OSQ96CW6 309 aaPredicted RBP10.6□□□□□ -0.71
VAPB-204ENST00000475243 DERL2Q9GZP9 239 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 FXYD6Q9H0Q3 95 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 OR51I1Q9H343 314 aa10.6□□□□□ -0.71
VAPB-204ENST00000475243 NOP16Q9Y3C1 178 aaKnown RBP10.6□□□□□ -0.71
VAPB-204ENST00000475243 AQP12BA6NM10 295 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 ENTPD1P49961 510 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 UGT8Q16880 541 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 NADK2Q4G0N4 442 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 AQP12AQ8IXF9 295 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 CCDC107Q8WV48 283 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 SCAMP4Q969E2 229 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 BIRC7Q96CA5 298 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 PSKH2Q96QS6 385 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 TMEM248Q9NWD8 314 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 TMED5Q9Y3A6 229 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 A0A1W2PP18 115 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 AURKAO14965 403 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 EPGNQ6UW88 154 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 ZNF227Q86WZ6 799 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 FBXL20Q96IG2 436 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 TRIM36Q9NQ86 728 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 B4GALT6Q9UBX8 382 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 ATXN7L1Q9ULK2 861 aaPredicted RBP10.59□□□□□ -0.71
VAPB-204ENST00000475243 PLIN4Q96Q06 1357 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 HAPLN1P10915 354 aaPredicted RBP10.59□□□□□ -0.71
VAPB-204ENST00000475243 SLC9A3P48764 834 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 PCLAFQ15004 111 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 PLCZ1Q86YW0 608 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 TGM7Q96PF1 710 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 CRTAC1Q9NQ79 661 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 LCHNA4D1U4 455 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 OR6C74A6NCV1 312 aa10.59□□□□□ -0.71
VAPB-204ENST00000475243 HTR1AP08908 422 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms