RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CCDC189A1A4V9 331 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 DYTNA2CJ06 578 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 LRIT2A6NDA9 550 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 ANKDD1BA6NHY2 528 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 TCP11X1B4DZS4 312 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 CCNT2O60583 730 aaKnown RBP10.53□□□□□ -0.72
CKS1B-206ENST00000474215 PRAMEF4O60810 478 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 B4GALT2O60909 372 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 KERAO60938 352 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 CLEC3AO75596 197 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 CDC123O75794 336 aaPredicted RBP10.53□□□□□ -0.72
CKS1B-206ENST00000474215 ITGAMP11215 1152 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 RNH1P13489 461 aaKnown RBP10.53□□□□□ -0.72
CKS1B-206ENST00000474215 EPORP19235 508 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 JAK1P23458 1154 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 CASP2P42575 452 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 TSFMP43897 325 aaKnown RBP10.53□□□□□ -0.72
CKS1B-206ENST00000474215 UQCRFS1P47985 274 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 BTN3A2P78410 334 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 SRSF1Q07955 248 aaKnown RBP eCLIP10.53□□□□□ -0.72
CKS1B-206ENST00000474215 LAPTM5Q13571 262 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 ZNF169Q14929 603 aaPredicted RBP10.53□□□□□ -0.72
CKS1B-206ENST00000474215 UAP1Q16222 522 aaPredicted RBP10.53□□□□□ -0.72
CKS1B-206ENST00000474215 FAM83EQ2M2I3 478 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 BTBD16Q32M84 506 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 SFT2D3Q587I9 215 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 UBAP2Q5T6F2 1119 aaKnown RBP10.53□□□□□ -0.72
CKS1B-206ENST00000474215 PRAMEF9Q5VWM5 478 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.53□□□□□ -0.72
CKS1B-206ENST00000474215 CENPLQ8N0S6 344 aaPredicted RBP10.53□□□□□ -0.72
CKS1B-206ENST00000474215 FAM26EQ8N5C1 309 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 AMER2Q8N7J2 671 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 CATSPER1Q8NEC5 780 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 RHEBL1Q8TAI7 183 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 KCTD4Q8WVF5 259 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 HAS2Q92819 552 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 EXT2Q93063 718 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 GAL3ST3Q96A11 431 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 MS4A6EQ96DS6 147 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 FAR2Q96K12 515 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 CNDP1Q96KN2 507 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 ATOH8Q96SQ7 321 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 FMO2Q99518 471 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 BARD1Q99728 777 aaKnown RBP10.53□□□□□ -0.72
CKS1B-206ENST00000474215 EFCAB11Q9BUY7 163 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 FUT8Q9BYC5 575 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 RBCK1Q9BYM8 510 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 SLC29A3Q9BZD2 475 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 AICDAQ9GZX7 198 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 SNX15Q9NRS6 342 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 PLA2G3Q9NZ20 509 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 STMN3Q9NZ72 180 aa10.53□□□□□ -0.72
CKS1B-206ENST00000474215 A0A096LPK6 155 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 SYCE1LA8MT33 242 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 A8MUI8 341 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 SUPT3HB4E1H0 165 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 C4orf51C9J302 202 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 FAM227AF5H4B4 570 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 UBXN8O00124 270 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 PSMD12O00232 456 aaPredicted RBP10.52□□□□□ -0.73
CKS1B-206ENST00000474215 PRMT3O60678 531 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 SUPT3HO75486 399 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 ACSL3O95573 720 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 ALDOAP04075 364 aaKnown RBP10.52□□□□□ -0.73
CKS1B-206ENST00000474215 UQCRHP07919 91 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 MTHFD2P13995 350 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 TYK2P29597 1187 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 ECHS1P30084 290 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 HNRNPH1P31943 449 aaKnown RBP10.52□□□□□ -0.73
CKS1B-206ENST00000474215 HPDP32754 393 aaPredicted RBP10.52□□□□□ -0.73
CKS1B-206ENST00000474215 OR4D2P58180 307 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 ARG2P78540 354 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 IRF9Q00978 393 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 IRF8Q02556 426 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 PCDH1Q08174 1060 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 CHIT1Q13231 466 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 ACAP2Q15057 778 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 TBCCQ15814 346 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 EXT1Q16394 746 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 HIST2H2ACQ16777 129 aaPredicted RBP10.52□□□□□ -0.73
CKS1B-206ENST00000474215 ADPRMQ3LIE5 342 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 PAGE2BQ5JRK9 111 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 ABHD17BQ5VST6 288 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 B3GNTL1Q67FW5 361 aaPredicted RBP10.52□□□□□ -0.73
CKS1B-206ENST00000474215 HIST2H2AA3Q6FI13 130 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 H3F3CQ6NXT2 135 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 LRRC70Q7Z2Q7 622 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 CEP112Q8N8E3 955 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 OR1N1Q8NGS0 311 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 M1APQ8TC57 530 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 CCT6BQ92526 530 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 PTCHD1Q96NR3 888 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 LPAR4Q99677 370 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 NPLQ9BXD5 320 aaPredicted RBP10.52□□□□□ -0.73
CKS1B-206ENST00000474215 RHBGQ9H310 441 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 CDC42EP4Q9H3Q1 356 aaKnown RBP10.52□□□□□ -0.73
CKS1B-206ENST00000474215 AGPAT4Q9NRZ5 378 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 OPTCQ9UBM4 332 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 TEKT2Q9UIF3 430 aa10.52□□□□□ -0.73
CKS1B-206ENST00000474215 NTNG1Q9Y2I2 539 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms