RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 DLEU7Q6UYE1 221 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 C9orf139Q6ZV77 190 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 COX8CQ7Z4L0 72 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 CPEB2Q7Z5Q1 589 aaKnown RBP3.82□□□□□ -1.8
BRCA1-212ENST00000473961 KIRREL3Q8IZU9 778 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 LRTM2Q8N967 370 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 TMEM185AQ8NFB2 350 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 SCARB1Q8WTV0 552 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 EPYCQ99645 322 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 IL12RB2Q99665 862 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 NKX3-1Q99801 234 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-212ENST00000473961 SPAG8Q99932 426 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-212ENST00000473961 CCDC3Q9BQI4 270 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 MTIF3Q9H2K0 278 aaKnown RBP3.82□□□□□ -1.8
BRCA1-212ENST00000473961 PIGVQ9NUD9 493 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 ACOXLQ9NUZ1 547 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 TAS2R3Q9NYW6 316 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 AURKCQ9UQB9 309 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 MRPS2Q9Y399 296 aaKnown RBP3.82□□□□□ -1.8
BRCA1-212ENST00000473961 TMED7Q9Y3B3 224 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 TRIP12Q14669 1992 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-212ENST00000473961 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 NKX6-3A6NJ46 265 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 TCP10L2B9ZVM9 353 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 H3BMM5 538 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 TLR4O00206 839 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 SLC1A7O00341 560 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 EEF2KO00418 725 aaKnown RBP3.81□□□□□ -1.8
BRCA1-212ENST00000473961 DYNC1I1O14576 645 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 CHEK1O14757 476 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 SYT7O43581 403 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 KIF5CO60282 957 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 CYTIPO60759 359 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 AADACP22760 399 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 ACP1P24666 158 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 GCNT1Q02742 428 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 GABPAQ06546 454 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 GIT2Q14161 759 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 SQLEQ14534 574 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 TAF7Q15545 349 aaPredicted RBP3.81□□□□□ -1.8
BRCA1-212ENST00000473961 STX1AQ16623 288 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 DNAJC21Q5F1R6 531 aaKnown RBP3.81□□□□□ -1.8
BRCA1-212ENST00000473961 ARHGEF16Q5VV41 709 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 TCEAL6Q6IPX3 200 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 PIGZQ86VD9 579 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 HSCBQ8IWL3 235 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 ELMOD2Q8IZ81 293 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 LSMEM2Q8N112 164 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 RFLNBQ8N5W9 214 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 STPG4Q8N801 248 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 GPRC5AQ8NFJ5 357 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 SPATA18Q8TC71 538 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 CHURC1Q8WUH1 139 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 DYRK2Q92630 601 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 FAM46BQ96A09 425 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 GIMAP5Q96F15 307 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 MARK4Q96L34 752 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 ACPTQ9BZG2 426 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 WWTR1Q9GZV5 400 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 NACA2Q9H009 215 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 RAB17Q9H0T7 212 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 CARD9Q9H257 536 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 RWDD1Q9H446 243 aaPredicted RBP3.81□□□□□ -1.8
BRCA1-212ENST00000473961 SPASTQ9UBP0 616 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 POLKQ9UBT6 870 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 DBF4Q9UBU7 674 aaPredicted RBP3.81□□□□□ -1.8
BRCA1-212ENST00000473961 PILRBQ9UKJ0 227 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 DNPEPQ9ULA0 475 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 SATB2Q9UPW6 733 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 AP1M2Q9Y6Q5 423 aa3.81□□□□□ -1.8
BRCA1-212ENST00000473961 BAZ1BQ9UIG0 1483 aaKnown RBP3.8□□□□□ -1.8
BRCA1-212ENST00000473961 FHAD1B1AJZ9 1412 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 UMODL1Q5DID0 1318 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 H0YIG0 161 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 CCSO14618 274 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 OGTO15294 1046 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 CIDEAO60543 219 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 KRT36O76013 467 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 CLPTM1O96005 669 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 TSHBP01222 138 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 CXCL10P02778 98 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 F7P08709 466 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-212ENST00000473961 SLC2A2P11168 524 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-212ENST00000473961 KRT5P13647 590 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 ALDH1B1P30837 517 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 RABIFP47224 123 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 CNN1P51911 297 aaKnown RBP3.8□□□□□ -1.8
BRCA1-212ENST00000473961 ZNF131P52739 623 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 LBX1P52954 281 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 DCDC1P59894 354 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 POLR2FP61218 127 aaKnown RBP3.8□□□□□ -1.8
BRCA1-212ENST00000473961 CDH18Q13634 790 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 CEACAM7Q14002 265 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 TEAD2Q15562 447 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 WDR38Q5JTN6 314 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 ZNF776Q68DI1 518 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-212ENST00000473961 ZNF324BQ6AW86 544 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-212ENST00000473961 SLC35E4Q6ICL7 350 aa3.8□□□□□ -1.8
BRCA1-212ENST00000473961 SNRNP48Q6IEG0 339 aaKnown RBP3.8□□□□□ -1.8
BRCA1-212ENST00000473961 DHRS11Q6UWP2 260 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms