RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 GSDMDP57764 484 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 XKR6Q5GH73 641 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 BSPRYQ5W0U4 402 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 FAM205BPQ63HN1 556 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 FIP1L1Q6UN15 594 aaKnown RBP4.74□□□□□ -1.65
CCDC39-202ENST00000471307 ARMCX2Q7L311 632 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 CCDC107Q8WV48 283 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 C18orf12Q96KH6 178 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 HSD17B14Q9BPX1 270 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 TEKT3Q9BXF9 490 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 MAK16Q9BXY0 300 aaKnown RBP4.74□□□□□ -1.65
CCDC39-202ENST00000471307 DPAGT1Q9H3H5 408 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 GOLPH3LQ9H4A5 285 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 OSGEPL1Q9H4B0 414 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 TUFT1Q9NNX1 390 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 ARHGEF38Q9NXL2 777 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 TAB2Q9NYJ8 693 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 ERAP1Q9NZ08 941 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 MTUS1Q9ULD2 1270 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 ZNF236Q9UL36 1845 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 LCTP09848 1927 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 MGAMO43451 1857 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 MCM3APO60318 1980 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 SYNDIG1LA6NDD5 238 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 DKC1O60832 514 aaKnown RBP eCLIP4.73□□□□□ -1.65
CCDC39-202ENST00000471307 ATP9AO75110 1047 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 SNAI1O95863 264 aaPredicted RBP4.73□□□□□ -1.65
CCDC39-202ENST00000471307 WDPCPO95876 746 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 CCT6AP40227 531 aaKnown RBP4.73□□□□□ -1.65
CCDC39-202ENST00000471307 PRMT2P55345 433 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 ITGB3BPQ13352 177 aaPredicted RBP4.73□□□□□ -1.65
CCDC39-202ENST00000471307 KARSQ15046 597 aaKnown RBP4.73□□□□□ -1.65
CCDC39-202ENST00000471307 CCDC183Q5T5S1 534 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 CAVIN1Q6NZI2 390 aaKnown RBP4.73□□□□□ -1.65
CCDC39-202ENST00000471307 ENOSF1Q7L5Y1 443 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 MIER3Q7Z3K6 550 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 COMMD2Q86X83 199 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 CATSPER3Q86XQ3 398 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 FAM114A1Q8IWE2 563 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 CEP57L1Q8IYX8 460 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 CNNM3Q8NE01 707 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 OR13J1Q8NGT2 312 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 OR2AJ1Q8NGZ0 328 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 PHLDA1Q8WV24 401 aaPredicted RBP4.73□□□□□ -1.65
CCDC39-202ENST00000471307 SEPT1Q8WYJ6 367 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 IRGQQ8WZA9 623 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 ERO1AQ96HE7 468 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 BAG1Q99933 345 aaPredicted RBP4.73□□□□□ -1.65
CCDC39-202ENST00000471307 PANK2Q9BZ23 570 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 TNMDQ9H2S6 317 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 MMP27Q9H306 513 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 CLSTN2Q9H4D0 955 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 MAGEF1Q9HAY2 307 aa4.73□□□□□ -1.65
CCDC39-202ENST00000471307 WSB2Q9NYS7 404 aaPredicted RBP4.73□□□□□ -1.65
CCDC39-202ENST00000471307 PCNX3Q9H6A9 2034 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 PP2D1A8MPX8 630 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 KPNA7A9QM74 516 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 XRCC3O43542 346 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 SLITRK3O94933 977 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 NXPH2O95156 264 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 SMC2O95347 1197 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 LYPLA2O95372 231 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 MOCS3O95396 460 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 GH1P01241 217 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 APOA4P06727 396 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 IGHV4-31P0DP07 118 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 CYP2B6P20813 491 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 QARSP47897 775 aaKnown RBP4.72□□□□□ -1.65
CCDC39-202ENST00000471307 B3GALT5-AS1P59052 145 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 PSMC5P62195 406 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 TSPY1Q01534 308 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 CAMK4Q16566 473 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 UGP2Q16851 508 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 HLA-BQ31612 363 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 DUSP28Q4G0W2 176 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 CELF3Q5SZQ8 465 aaKnown RBP4.72□□□□□ -1.65
CCDC39-202ENST00000471307 WLSQ5T9L3 541 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 MFSD14CQ5VZR4 134 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 ARMC3Q5W041 872 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 SPINK14Q6IE38 97 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 FIGLAQ6QHK4 219 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 RBM43Q6ZSC3 357 aaKnown RBP4.72□□□□□ -1.65
CCDC39-202ENST00000471307 C4orf19Q8IY42 314 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 DCLK2Q8N568 766 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 ATP6V0A1Q93050 837 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 DHX58Q96C10 678 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 PAGE5Q96GU1 130 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 SPATA17Q96L03 361 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 NSMCE3Q96MG7 304 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 PKP2Q99959 881 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 KIFC3Q9BVG8 833 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 FNDC11Q9BVV2 318 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 OSER1Q9NX31 292 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 TMEM5Q9Y2B1 443 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 WDR37Q9Y2I8 494 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 Q9Y3F1 56 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 MYH9P35579 1960 aaKnown RBP4.72□□□□□ -1.65
CCDC39-202ENST00000471307 THSD7BQ9C0I4 1608 aa4.72□□□□□ -1.65
CCDC39-202ENST00000471307 CASP8AP2Q9UKL3 1982 aa4.71□□□□□ -1.66
CCDC39-202ENST00000471307 LOC100509620A0A075B734 347 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms