RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 COX15Q7KZN9 410 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 MILR1Q7Z6M3 343 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 MYLK4Q86YV6 388 aaPredicted RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 APLFQ8IW19 511 aaPredicted RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 KIRREL3Q8IZU9 778 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 C4orf33Q8N1A6 199 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 AMER3Q8N944 861 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 BANPQ8N9N5 519 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 KCT2Q8NC54 265 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 OR7G3Q8NG95 312 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 ZCCHC10Q8TBK6 192 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 STT3BQ8TCJ2 826 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 ADAMTS17Q8TE56 1095 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 UTP15Q8TED0 518 aaKnown RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 ZNF473Q8WTR7 871 aaKnown RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 MS4A6EQ96DS6 147 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 SMIM10Q96HG1 83 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 SERPINI1Q99574 410 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 SPSB2Q99619 263 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 ARHGAP9Q9BRR9 750 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 TBCDQ9BTW9 1192 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 SPNS1Q9H2V7 528 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 AKIRIN1Q9H9L7 192 aaPredicted RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 COPS7BQ9H9Q2 264 aaPredicted RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 LYRM4Q9HD34 91 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 SLC22A11Q9NSA0 550 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 NMRK1Q9NWW6 199 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 C19orf25Q9UFG5 118 aaPredicted RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 TRPS1Q9UHF7 1281 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 ZNF490Q9ULM2 529 aaPredicted RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 MRPS33Q9Y291 106 aaKnown RBP8.11□□□□□ -1.11
SSBP1-208ENST00000469123 MAN2B2Q9Y2E5 1009 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 NAALAD2Q9Y3Q0 740 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 MAU2Q9Y6X3 613 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 SPACA6W5XKT8 324 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 MED13Q9UHV7 2174 aa8.11□□□□□ -1.11
SSBP1-208ENST00000469123 A0A1W2PQ72 361 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 G3V2L1 256 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 AGPSO00116 658 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 PSMD12O00232 456 aaPredicted RBP8.1□□□□□ -1.11
SSBP1-208ENST00000469123 NKX2-8O15522 239 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 ERI3O43414 337 aaKnown RBP8.1□□□□□ -1.11
SSBP1-208ENST00000469123 B3GALT2O43825 422 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 PRAMEF4O60810 478 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 TRIM13O60858 407 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 SCELO95171 688 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 BMP10O95393 424 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 MED26O95402 600 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 HEXBP07686 556 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 ZNF888P0CJ79 500 aaPredicted RBP8.1□□□□□ -1.11
SSBP1-208ENST00000469123 PRKAR1AP10644 381 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 PCNAP12004 261 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 WT1P19544 449 aaPredicted RBP8.1□□□□□ -1.11
SSBP1-208ENST00000469123 RAP1GDS1P52306 607 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 MTTPP55157 894 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 KLC1Q07866 573 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 GALNT1Q10472 559 aaPredicted RBP8.1□□□□□ -1.11
SSBP1-208ENST00000469123 HYAL2Q12891 473 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 TRAF3Q13114 568 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 SRSF6Q13247 344 aaKnown RBP8.1□□□□□ -1.11
SSBP1-208ENST00000469123 IL10RAQ13651 578 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 ERV3-1Q14264 604 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 RBBP7Q16576 425 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 CPSF6Q16630 551 aaKnown RBP eCLIP8.1□□□□□ -1.11
SSBP1-208ENST00000469123 TUBB8Q3ZCM7 444 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 DEFB134Q4QY38 66 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 PRAMEF9Q5VWM5 478 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 KHDRBS2Q5VWX1 349 aaKnown RBP8.1□□□□□ -1.11
SSBP1-208ENST00000469123 FRG2Q64ET8 278 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 TTC19Q6DKK2 380 aaPredicted RBP8.1□□□□□ -1.11
SSBP1-208ENST00000469123 C16orf46Q6P387 395 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 FRMD7Q6ZUT3 714 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 GPRIN3Q6ZVF9 776 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 MRGPREQ86SM8 312 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 HPS6Q86YV9 775 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 CLEC1AQ8NC01 280 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 ARMC2Q8NEN0 867 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 OR9A4Q8NGU2 314 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 OR51Q1Q8NH59 317 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 HUS1BQ8NHY5 278 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 METTL21AQ8WXB1 218 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 RGMAQ96B86 450 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 TBC1D20Q96BZ9 403 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 CNDP1Q96KN2 507 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 ZIM3Q96PE6 472 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 TMEM237Q96Q45 408 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 FRG2BQ96QU4 278 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 SERINC2Q96SA4 455 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 CRB3Q9BUF7 120 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 YIPF2Q9BWQ6 316 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 MS4A8Q9BY19 250 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 ELOVL6Q9H5J4 265 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 SYNPO2LQ9H987 977 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 BRF2Q9HAW0 419 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 SEMA4BQ9NPR2 832 aaPredicted RBP8.1□□□□□ -1.11
SSBP1-208ENST00000469123 DMRT3Q9NQL9 472 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 OXSMQ9NWU1 459 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 MS4A12Q9NXJ0 267 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 AHSPQ9NZD4 102 aa8.1□□□□□ -1.11
SSBP1-208ENST00000469123 CTSFQ9UBX1 484 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms