RNA–Protein interactions for RNA: ENST00000466217.5

ATG9A-219, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-219ENST00000466217 HERC3Q15034 1050 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 KCTD19Q17RG1 926 aaPredicted RBP12.9□□□□□ -0.34
ATG9A-219ENST00000466217 ERCC6LQ2NKX8 1250 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 BBS9Q3SYG4 887 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 ANKRD22Q5VYY1 191 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 NEPROQ6NW34 567 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 CYHR1Q6ZMK1 362 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 ASPGQ86U10 573 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 CCDC25Q86WR0 208 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 ZNF227Q86WZ6 799 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 SPNS2Q8IVW8 549 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 AFAP1L2Q8N4X5 818 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 EIF1ADQ8N9N8 165 aaKnown RBP12.9□□□□□ -0.34
ATG9A-219ENST00000466217 KCT2Q8NC54 265 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 C16orf52Q8NHV5 167 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 ZCCHC10Q8TBK6 192 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 TSLPQ969D9 159 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 PEX11GQ96HA9 241 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 FMO2Q99518 471 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 SLC24A3Q9HC58 644 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 NPDC1Q9NQX5 325 aaPredicted RBP12.9□□□□□ -0.34
ATG9A-219ENST00000466217 ABCF3Q9NUQ8 709 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 GRHL1Q9NZI5 618 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 KLF13Q9Y2Y9 288 aaPredicted RBP12.9□□□□□ -0.34
ATG9A-219ENST00000466217 DHRS7Q9Y394 339 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 NAALAD2Q9Y3Q0 740 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 MAD1L1Q9Y6D9 718 aa12.9□□□□□ -0.34
ATG9A-219ENST00000466217 TCRBV7S3A2A0A539 114 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 MAGEB16A2A368 324 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 TFECO14948 347 aaPredicted RBP12.89□□□□□ -0.35
ATG9A-219ENST00000466217 EIF3HO15372 352 aaKnown RBP eCLIP12.89□□□□□ -0.35
ATG9A-219ENST00000466217 ZNHIT1O43257 154 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 FHP07954 510 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 JAK1P23458 1154 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 MSX1P28360 303 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 GRK3P35626 688 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 ART1P52961 327 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 MLF1P58340 268 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 SKP1P63208 163 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 CAPN13Q6MZZ7 669 aaPredicted RBP12.89□□□□□ -0.35
ATG9A-219ENST00000466217 NIPAL1Q6NVV3 410 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 CD163Q86VB7 1156 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 SLC26A11Q86WA9 606 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 C17orf64Q86WR6 236 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 DMRTC2Q8IXT2 367 aaPredicted RBP12.89□□□□□ -0.35
ATG9A-219ENST00000466217 MARVELD2Q8N4S9 558 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 FBXO25Q8TCJ0 367 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 SLC13A3Q8WWT9 602 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 TBC1D20Q96BZ9 403 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 LRRC39Q96DD0 335 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 SERPINB12Q96P63 405 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 MACROD1Q9BQ69 325 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 NAT9Q9BTE0 207 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 TMUB1Q9BVT8 246 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 SARGQ9BW04 601 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 TP63Q9H3D4 680 aaPredicted RBP12.89□□□□□ -0.35
ATG9A-219ENST00000466217 PLSCR2Q9NRY7 297 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 KCNN3Q9UGI6 736 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 COMMD10Q9Y6G5 202 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 NAV3Q8IVL0 2385 aa12.89□□□□□ -0.35
ATG9A-219ENST00000466217 INTS1Q8N201 2190 aaKnown RBP12.88□□□□□ -0.35
ATG9A-219ENST00000466217 HCFC1P51610 2035 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 SCN3AQ9NY46 2000 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 A0A1B0GTH9 108 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 SAGE2PA6NJ88 616 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 KLRC4-KLRK1H3BQV0 150 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 FCHO1O14526 889 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 LCMT2O60294 686 aaKnown RBP12.88□□□□□ -0.35
ATG9A-219ENST00000466217 ERLIN1O75477 346 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 CDC123O75794 336 aaPredicted RBP12.88□□□□□ -0.35
ATG9A-219ENST00000466217 TOXO94900 526 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 TPOP07202 933 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 TFEBP19484 476 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 CCND1P24385 295 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 MEOX1P50221 254 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 PDIA2Q13087 525 aaKnown RBP12.88□□□□□ -0.35
ATG9A-219ENST00000466217 SLMAPQ14BN4 828 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 LRRC8EQ6NSJ5 796 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 QSOX2Q6ZRP7 698 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 UBE2R2Q712K3 238 aaPredicted RBP12.88□□□□□ -0.35
ATG9A-219ENST00000466217 KIF2BQ8N4N8 673 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 MFSD9Q8NBP5 474 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 MYRIPQ8NFW9 859 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 GABPB2Q8TAK5 448 aaPredicted RBP12.88□□□□□ -0.35
ATG9A-219ENST00000466217 RND1Q92730 232 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 CCDC138Q96M89 665 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 RBCK1Q9BYM8 510 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 CCDC68Q9H2F9 335 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 ANKZF1Q9H8Y5 726 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 CLK4Q9HAZ1 481 aaKnown RBP12.88□□□□□ -0.35
ATG9A-219ENST00000466217 SAYSD1Q9NPB0 183 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 NFU1Q9UMS0 254 aa12.88□□□□□ -0.35
ATG9A-219ENST00000466217 MAP1AP78559 2803 aaPredicted RBP12.88□□□□□ -0.35
ATG9A-219ENST00000466217 ABCA2Q9BZC7 2435 aa12.87□□□□□ -0.35
ATG9A-219ENST00000466217 FEZF1A0PJY2 475 aa12.87□□□□□ -0.35
ATG9A-219ENST00000466217 PRMT3O60678 531 aa12.87□□□□□ -0.35
ATG9A-219ENST00000466217 GALR3O60755 368 aaPredicted RBP12.87□□□□□ -0.35
ATG9A-219ENST00000466217 HOXD4P09016 255 aaPredicted RBP12.87□□□□□ -0.35
ATG9A-219ENST00000466217 PWP1Q13610 501 aa12.87□□□□□ -0.35
ATG9A-219ENST00000466217 CMPK2Q5EBM0 449 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms