RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 ZNF320A2RRD8 509 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 A4D1N5 150 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.6□□□□□ -1.83
LRCH3-211ENST00000466054 DUS4LO95620 317 aaKnown RBP3.6□□□□□ -1.83
LRCH3-211ENST00000466054 SLC16A8O95907 504 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 MT-ND2P03891 347 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 ITIH1P19827 911 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 EDNRAP25101 427 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 HNF4AP41235 474 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 KCNJ1P48048 391 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 SNU13P55769 128 aaKnown RBP3.6□□□□□ -1.83
LRCH3-211ENST00000466054 ST8SIA6P61647 398 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 ASIC1P78348 528 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 AKAP17AQ02040 695 aaKnown RBP3.6□□□□□ -1.83
LRCH3-211ENST00000466054 NECTIN1Q15223 517 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 FUT11Q495W5 492 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 TCEAL6Q6IPX3 200 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 METTL7BQ6UX53 244 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 CLYBLQ8N0X4 340 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 PRSS33Q8NF86 280 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 OR10G7Q8NGN6 311 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 VMP1Q96GC9 406 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 RASL10BQ96S79 203 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 HNRNPABQ99729 332 aaKnown RBP3.6□□□□□ -1.83
LRCH3-211ENST00000466054 UPF3AQ9H1J1 476 aaKnown RBP3.6□□□□□ -1.83
LRCH3-211ENST00000466054 POMT2Q9UKY4 750 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 NCKAP1Q9Y2A7 1128 aa3.6□□□□□ -1.83
LRCH3-211ENST00000466054 HBS1LQ9Y450 684 aaKnown RBP3.6□□□□□ -1.83
LRCH3-211ENST00000466054 A0A0J9YWU9 116 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 C13orf42A0A1B0GVH6 325 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 ANKDD1BA6NHY2 528 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 NPIPB9F8W1W9 429 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 K7EQD1 137 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 MTRF1O75570 445 aaKnown RBP3.59□□□□□ -1.83
LRCH3-211ENST00000466054 GRAP2O75791 330 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 TGDSO95455 350 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 C4BPBP20851 252 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 CTNNA2P26232 953 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 CSRP3P50461 194 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 DHODHQ02127 395 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 ABRQ12979 859 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 CALCOCO2Q13137 446 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 MOGAT2Q3SYC2 334 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 C2CD6Q53TS8 623 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 LRRC38Q5VT99 294 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 PM20D1Q6GTS8 502 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 PODNL1Q6PEZ8 512 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 LCLAT1Q6UWP7 414 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 C3P1Q6ZMU1 363 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 STXBP4Q6ZWJ1 553 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 PIWIL3Q7Z3Z3 882 aaKnown RBP3.59□□□□□ -1.83
LRCH3-211ENST00000466054 TRMT11Q7Z4G4 463 aaKnown RBP3.59□□□□□ -1.83
LRCH3-211ENST00000466054 KIAA0895Q8NCT3 520 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 AGAP4Q96P64 663 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 PCDHB18PQ96TA0 734 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 RBM4BQ9BQ04 359 aaKnown RBP3.59□□□□□ -1.83
LRCH3-211ENST00000466054 PAPOLGQ9BWT3 736 aaKnown RBP3.59□□□□□ -1.83
LRCH3-211ENST00000466054 IDI2Q9BXS1 227 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 RAB9BQ9NP90 201 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 MRPL17Q9NRX2 175 aaKnown RBP3.59□□□□□ -1.83
LRCH3-211ENST00000466054 MIS18AQ9NYP9 233 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 KIAA1217Q5T5P2 1943 aa3.59□□□□□ -1.83
LRCH3-211ENST00000466054 FAM149AA5PLN7 773 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 TCP10L2B9ZVM9 353 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 TFECO14948 347 aaPredicted RBP3.58□□□□□ -1.84
LRCH3-211ENST00000466054 MAGEB2O15479 319 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 ACSL4O60488 711 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 CLN5O75503 358 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 GIFP27352 417 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 PDHA2P29803 388 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 SRD5A2P31213 254 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 GPR183P32249 361 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 SLC1A3P43003 542 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 KRTAP12-2P59991 146 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 STX1BP61266 288 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 ERVK-16P61578 105 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 NFATC2Q13469 925 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 NFE2L1Q14494 772 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 SLMAPQ14BN4 828 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 CCDC158Q5M9N0 1113 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 SPANXN4Q5MJ08 99 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 AGAP6Q5VW22 663 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 SLC27A4Q6P1M0 643 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 C5orf24Q7Z6I8 188 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 ZFAND4Q86XD8 727 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 KLHDC8AQ8IYD2 350 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 ZNF440Q8IYI8 595 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 TDHQ8IZJ6 230 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 SYCP3Q8IZU3 236 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 METTL4Q8N3J2 472 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 TMCO5AQ8N6Q1 288 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 RNF149Q8NC42 400 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 ZNF689Q96CS4 500 aaPredicted RBP3.58□□□□□ -1.84
LRCH3-211ENST00000466054 LGMNQ99538 433 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 FUT8Q9BYC5 575 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 TRIM15Q9C019 465 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 TMOD3Q9NYL9 352 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 THEGQ9P2T0 379 aa3.58□□□□□ -1.84
LRCH3-211ENST00000466054 DBF4Q9UBU7 674 aaPredicted RBP3.58□□□□□ -1.84
LRCH3-211ENST00000466054 ITM2BQ9Y287 266 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms