RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 PTCHD1Q96NR3 888 aa11.69□□□□□ -0.54
SOX2-OT-203ENST00000466034 HES7Q9BYE0 225 aa11.69□□□□□ -0.54
SOX2-OT-203ENST00000466034 CDCP1Q9H5V8 836 aa11.69□□□□□ -0.54
SOX2-OT-203ENST00000466034 POPDC3Q9HBV1 291 aa11.69□□□□□ -0.54
SOX2-OT-203ENST00000466034 MOCS1Q9NZB8 636 aa11.69□□□□□ -0.54
SOX2-OT-203ENST00000466034 ZFATQ9P243 1243 aa11.69□□□□□ -0.54
SOX2-OT-203ENST00000466034 OARD1Q9Y530 152 aa11.69□□□□□ -0.54
SOX2-OT-203ENST00000466034 PSAT1Q9Y617 370 aa11.69□□□□□ -0.54
SOX2-OT-203ENST00000466034 KCNE2Q9Y6J6 123 aa11.69□□□□□ -0.54
SOX2-OT-203ENST00000466034 FAM95CA0A1B0GW59 222 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 CTAGE15A4D2H0 777 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 CDC7O00311 574 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 NDC80O14777 642 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 TP73O15350 636 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 PRMT3O60678 531 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 SLC19A2O60779 497 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 WISP2O76076 250 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 B3GALT4O96024 378 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 SP1P08047 785 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 RNH1P13489 461 aaKnown RBP11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 AGAP20933 346 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 GSTM2P28161 218 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 TNFRSF8P28908 595 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 TRHRP34981 398 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 SLC6A12P48065 614 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 ITGA8P53708 1063 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 CASP6P55212 293 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 OLR1P78380 273 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 DR1Q01658 176 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 ALDH6A1Q02252 535 aaKnown RBP11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 HP1BP3Q5SSJ5 553 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 SPINK14Q6IE38 97 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 SLC25A25Q6KCM7 469 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 BNC2Q6ZN30 1099 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 MRGPRGQ86SM5 289 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 TMPRSS11BQ86T26 416 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 ADAMTSL2Q86TH1 951 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 CTAGE6Q86UF2 777 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 SIAH3Q8IW03 269 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 FAM98AQ8NCA5 519 aaKnown RBP11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 NFAM1Q8NET5 270 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 TTLQ8NG68 377 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 SEC16BQ96JE7 1060 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 TSNARE1Q96NA8 513 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 MCMBPQ9BTE3 642 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 AICDAQ9GZX7 198 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 KCNF1Q9H3M0 494 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 RUBCNLQ9H714 662 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 PRDM9Q9NQV7 894 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 KLHL1Q9NR64 748 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 TRMT1Q9NXH9 659 aaKnown RBP11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 NSMCE4AQ9NXX6 385 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 SLC22A14Q9Y267 594 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 MMACHCQ9Y4U1 282 aa11.68□□□□□ -0.54
SOX2-OT-203ENST00000466034 ARHGAP10A1A4S6 786 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 NPEPPSL1A6NEC2 478 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 C4orf51C9J302 202 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 CCDC188H7C350 402 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 PSMD12O00232 456 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 NME2P1O60361 137 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 B4GALT2O60909 372 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 PRF1P14222 555 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 NME2P22392 152 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 TPP2P29144 1249 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 MLF1P58340 268 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 TAS2R39P59534 338 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 RAB8AP61006 207 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 BTG2P78543 158 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 OC90Q02509 493 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 SRSF11Q05519 484 aaKnown RBP11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 GTF3C1Q12789 2109 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 RBBP5Q15291 538 aaKnown RBP11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 TERF2Q15554 542 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 C3AR1Q16581 482 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 ZNF630Q2M218 657 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 XKRXQ6PP77 449 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 GALNTL5Q7Z4T8 443 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 SPPL2CQ8IUH8 684 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 ANKMY2Q8IV38 441 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 KLHL7Q8IXQ5 586 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 CA13Q8N1Q1 262 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 KIF2BQ8N4N8 673 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 FBXO36Q8NEA4 188 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 ARMC2Q8NEN0 867 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 GAL3ST3Q96A11 431 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 RHBDF1Q96CC6 855 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 MAGED4Q96JG8 741 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 TRIM51Q9BSJ1 452 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 NPLQ9BXD5 320 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 UNKQ9C0B0 810 aaKnown RBP11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 PITHD1Q9GZP4 211 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 RHOJQ9H4E5 214 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 KLHL31Q9H511 634 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 NT5DC2Q9H857 520 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 CHST11Q9NPF2 352 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 NECTIN3Q9NQS3 549 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 ANKRD10Q9NXR5 420 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 LRFN1Q9P244 771 aa11.67□□□□□ -0.54
SOX2-OT-203ENST00000466034 PKDREJQ9NTG1 2253 aa11.66□□□□□ -0.54
SOX2-OT-203ENST00000466034 SLC25A12O75746 678 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms