RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 RASSF1Q9NS23 344 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 INTS10Q9NVR2 710 aaKnown RBP13.5□□□□□ -0.25
SMC1A-204ENST00000463684 KCMF1Q9P0J7 381 aa13.5□□□□□ -0.25
SMC1A-204ENST00000463684 TCRBV16S1A1N1A0A5B0 115 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 CTAGE9A4FU28 777 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 PSMD12O00232 456 aaPredicted RBP13.49□□□□□ -0.25
SMC1A-204ENST00000463684 NDUFS4O43181 175 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 OR1F1O43749 312 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 DNAJB6O75190 326 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 FTCDO95954 541 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 SERPIND1P05546 499 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 ZSCAN5DPP0CG00 497 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 GLI4P10075 376 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 CDH1P12830 882 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 PAMP19021 973 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 MAOAP21397 527 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 CCND1P24385 295 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 RPL22P35268 128 aaKnown RBP13.49□□□□□ -0.25
SMC1A-204ENST00000463684 SSR4P51571 173 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 BASP1P80723 227 aaKnown RBP13.49□□□□□ -0.25
SMC1A-204ENST00000463684 PWP1Q13610 501 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 SLC25A35Q3KQZ1 300 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 NEPROQ6NW34 567 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 C4orf22Q6V702 233 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 CENPUQ71F23 418 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 ABHD13Q7L211 337 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 SLC22A16Q86VW1 577 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 CILP2Q8IUL8 1156 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 AFAP1L2Q8N4X5 818 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 TBC1D19Q8N5T2 526 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 ACRBPQ8NEB7 543 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 SMC6Q96SB8 1091 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 CCDC77Q9BR77 488 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 TSGA10Q9BZW7 698 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 CLK4Q9HAZ1 481 aaKnown RBP13.49□□□□□ -0.25
SMC1A-204ENST00000463684 PRDM9Q9NQV7 894 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 SYBUQ9NX95 663 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 YARS2Q9Y2Z4 477 aaKnown RBP13.49□□□□□ -0.25
SMC1A-204ENST00000463684 DHRS7Q9Y394 339 aa13.49□□□□□ -0.25
SMC1A-204ENST00000463684 A0A0G2JNJ9 132 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 FAM166BA8MTA8 275 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 A8MVJ9 347 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 FAM47E-STBD1D6RA91 191 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 CEP104O60308 925 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 NR0B1P51843 470 aaKnown RBP13.48□□□□□ -0.25
SMC1A-204ENST00000463684 RGS1Q08116 209 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 HYAL2Q12891 473 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 NAE1Q13564 534 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 SEL1L2Q5TEA6 688 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 KIAA0930Q6ICG6 404 aaPredicted RBP13.48□□□□□ -0.25
SMC1A-204ENST00000463684 AGTRAPQ6RW13 159 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 WDR53Q7Z5U6 358 aaPredicted RBP13.48□□□□□ -0.25
SMC1A-204ENST00000463684 CDC20BQ86Y33 519 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 PALM2Q8IXS6 379 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 APCDD1LQ8NCL9 501 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 PSD4Q8NDX1 1056 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 B3GNT7Q8NFL0 401 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 OR2M7Q8NG81 312 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 GIMAP7Q8NHV1 300 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 KCNJ9Q92806 393 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 MBD6Q96DN6 1003 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 ATG10Q9H0Y0 220 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 ZDHHC11Q9H8X9 412 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 DEPPQ9NTK1 212 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 HPF1Q9NWY4 346 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 Q9UFV3 132 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 ACAD8Q9UKU7 415 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 SOX13Q9UN79 622 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 SH2B3Q9UQQ2 575 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 HEATR5BQ9P2D3 2071 aa13.48□□□□□ -0.25
SMC1A-204ENST00000463684 INTS1Q8N201 2190 aaKnown RBP13.47□□□□□ -0.25
SMC1A-204ENST00000463684 MYO1DO94832 1006 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 B3GALT4O96024 378 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 ZNF888P0CJ79 500 aaPredicted RBP13.47□□□□□ -0.25
SMC1A-204ENST00000463684 RNH1P13489 461 aaKnown RBP13.47□□□□□ -0.25
SMC1A-204ENST00000463684 ADSLP30566 484 aaPredicted RBP13.47□□□□□ -0.25
SMC1A-204ENST00000463684 CCR8P51685 355 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 SNTB1Q13884 538 aaKnown RBP13.47□□□□□ -0.25
SMC1A-204ENST00000463684 NDUFAF5Q5TEU4 345 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 LCTLQ6UWM7 567 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 Q71RC1 249 aaPredicted RBP13.47□□□□□ -0.25
SMC1A-204ENST00000463684 PIWIL4Q7Z3Z4 852 aaKnown RBP13.47□□□□□ -0.25
SMC1A-204ENST00000463684 KIAA1328Q86T90 577 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 LIX1LQ8IVB5 337 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 GPALPP1Q8IXQ4 340 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 ASB15Q8WXK1 588 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 LRRC46Q96FV0 321 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 HES6Q96HZ4 224 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 HAUS8Q9BT25 410 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 SARGQ9BW04 601 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 RHBGQ9H310 441 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 NECTIN3Q9NQS3 549 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 CRIM1Q9NZV1 1036 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 ZFATQ9P243 1243 aa13.47□□□□□ -0.25
SMC1A-204ENST00000463684 FBN3Q75N90 2809 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 IGKV3D-11A0A0A0MRZ8 115 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 PINLYPA6NC86 204 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 URADA6NGE7 173 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 A6NNC1 897 aa13.46□□□□□ -0.25
SMC1A-204ENST00000463684 SLC16A5O15375 505 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms