RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 PNCKQ6P2M8 343 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 HSD11B1LQ7Z5J1 315 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 PARGQ86W56 976 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 GATAD2AQ86YP4 633 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 VRK3Q8IV63 474 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 EID3Q8N140 333 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 KRTCAP2Q8N6L1 136 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 WDR20Q8TBZ3 569 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 MAGEE2Q8TD90 523 aaPredicted RBP9.51□□□□□ -0.89
PTPRD-207ENST00000463477 CYGBQ8WWM9 190 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 ELMO1Q92556 727 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 TMBIM1Q969X1 311 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 REXO5Q96IC2 774 aaKnown RBP9.51□□□□□ -0.89
PTPRD-207ENST00000463477 MPP4Q96JB8 637 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 VPS50Q96JG6 964 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 CCDC138Q96M89 665 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 APOOQ9BUR5 198 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 IKZF5Q9H5V7 419 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 DDX18Q9NVP1 670 aaKnown RBP9.51□□□□□ -0.89
PTPRD-207ENST00000463477 ZNHIT2Q9UHR6 403 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 ADGRE2Q9UHX3 823 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 PCDHB14Q9Y5E9 798 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 SLC5A10A0PJK1 596 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 CREG1O75629 220 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 PIAS2O75928 621 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 ADRB1P08588 477 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 THRBP10828 461 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 ETS2P15036 469 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 NME1P15531 152 aaKnown RBP9.51□□□□□ -0.89
PTPRD-207ENST00000463477 MAGEA2P43356 314 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 HLCSP50747 726 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 EIF2B5Q13144 721 aaKnown RBP9.51□□□□□ -0.89
PTPRD-207ENST00000463477 CHIT1Q13231 466 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 SGO1Q5FBB7 561 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 TPRG1LQ5T0D9 272 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 CCNYL2Q5T2Q4 361 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 TTC23Q5W5X9 447 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 GRHL2Q6ISB3 625 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 Q6ZVL8 140 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 SERPINA11Q86U17 422 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 GPR180Q86V85 440 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 ZDHHC13Q8IUH4 622 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 ERI1Q8IV48 349 aaKnown RBP9.51□□□□□ -0.89
PTPRD-207ENST00000463477 ZNF786Q8N393 782 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 ZCCHC7Q8N3Z6 543 aaKnown RBP9.51□□□□□ -0.89
PTPRD-207ENST00000463477 SLC25A45Q8N413 288 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 PLA2G15Q8NCC3 412 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 OR8J2Q8NGG1 315 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 ZNF420Q8TAQ5 688 aaPredicted RBP9.51□□□□□ -0.89
PTPRD-207ENST00000463477 GLYATL1Q969I3 302 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 SDCCAG3Q96C92 435 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 C11orf24Q96F05 449 aaPredicted RBP9.51□□□□□ -0.89
PTPRD-207ENST00000463477 SLC47A1Q96FL8 570 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 DTD2Q96FN9 168 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 TUBA1CQ9BQE3 449 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 SPATA9Q9BWV2 254 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 PIF1Q9H611 641 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 FAM120CQ9NX05 1096 aaKnown RBP9.51□□□□□ -0.89
PTPRD-207ENST00000463477 GPRC5BQ9NZH0 403 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 KLF15Q9UIH9 416 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 RUVBL1Q9Y265 456 aaKnown RBP9.51□□□□□ -0.89
PTPRD-207ENST00000463477 SLC22A14Q9Y267 594 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 BTBD3Q9Y2F9 522 aa9.51□□□□□ -0.89
PTPRD-207ENST00000463477 NUP214P35658 2090 aaPredicted RBP9.5□□□□□ -0.89
PTPRD-207ENST00000463477 TMEM131Q92545 1883 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 MED19A0JLT2 244 aaPredicted RBP9.5□□□□□ -0.89
PTPRD-207ENST00000463477 ARHGEF33A8MVX0 844 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 FADS2P1A8MWK0 482 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 H3BSA7 217 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 SCAMP1O15126 338 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 TNFSF14O43557 240 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 PRAMEF4O60810 478 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 TRMUO75648 421 aaKnown RBP9.5□□□□□ -0.89
PTPRD-207ENST00000463477 SNAP29O95721 258 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 CATP04040 527 aaKnown RBP9.5□□□□□ -0.89
PTPRD-207ENST00000463477 HTR1BP28222 390 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 TEAD1P28347 426 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 SLC5A2P31639 672 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 ETV3P41162 512 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 KIR3DL1P43629 444 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 SIM1P81133 766 aaPredicted RBP9.5□□□□□ -0.89
PTPRD-207ENST00000463477 PPP2R2BQ00005 443 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 LRRC74AQ0VAA2 488 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 RFX4Q33E94 735 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 C11orf91Q3C1V1 193 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 ZNF658BQ4V348 819 aaPredicted RBP9.5□□□□□ -0.89
PTPRD-207ENST00000463477 ZC3H12BQ5HYM0 836 aaKnown RBP9.5□□□□□ -0.89
PTPRD-207ENST00000463477 PRAMEF9Q5VWM5 478 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 NOXRED1Q6NXP6 359 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 ERICH5Q6P6B1 374 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 TBPL2Q6SJ96 375 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 ZNF765Q7L2R6 523 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 GPR155Q7Z3F1 870 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 GPR141Q7Z602 305 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 CAMKMTQ7Z624 323 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 SLC22A15Q8IZD6 547 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 OR56A3Q8NH54 315 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 NUDT8Q8WV74 236 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 FIG4Q92562 907 aa9.5□□□□□ -0.89
PTPRD-207ENST00000463477 FAM162AQ96A26 154 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms