RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ALG8Q9BVK2 526 aa7.13□□□□□ -1.27
UBE4B-204ENST00000462658 FAM107BQ9H098 131 aa7.13□□□□□ -1.27
UBE4B-204ENST00000462658 SMOXQ9NWM0 555 aa7.13□□□□□ -1.27
UBE4B-204ENST00000462658 FBXL12Q9NXK8 326 aa7.13□□□□□ -1.27
UBE4B-204ENST00000462658 CPSF2Q9P2I0 782 aaKnown RBP7.13□□□□□ -1.27
UBE4B-204ENST00000462658 COPG2Q9UBF2 871 aa7.13□□□□□ -1.27
UBE4B-204ENST00000462658 SERGEFQ9UGK8 458 aa7.13□□□□□ -1.27
UBE4B-204ENST00000462658 TRMT6Q9UJA5 497 aaKnown RBP7.13□□□□□ -1.27
UBE4B-204ENST00000462658 CA14Q9ULX7 337 aa7.13□□□□□ -1.27
UBE4B-204ENST00000462658 MMP17Q9ULZ9 603 aa7.13□□□□□ -1.27
UBE4B-204ENST00000462658 SCML1Q9UN30 329 aa7.13□□□□□ -1.27
UBE4B-204ENST00000462658 NCKAP1Q9Y2A7 1128 aa7.13□□□□□ -1.27
UBE4B-204ENST00000462658 DHRS7Q9Y394 339 aa7.13□□□□□ -1.27
UBE4B-204ENST00000462658 MTF2Q9Y483 593 aaPredicted RBP7.13□□□□□ -1.27
UBE4B-204ENST00000462658 MUC6Q6W4X9 2439 aa7.13□□□□□ -1.27
UBE4B-204ENST00000462658 COL4A2P08572 1712 aa7.13□□□□□ -1.27
UBE4B-204ENST00000462658 A1L4Q6 167 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 IGLON5A6NGN9 336 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 LINC00473A8K010 186 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 TARM1B6A8C7 271 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 G3V2L1 256 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 NDUFAB1O14561 156 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 KLF11O14901 512 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 ZBTB14O43829 449 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 MTX2O75431 263 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 PIAS2O75928 621 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 TM7SF2O76062 418 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 OR56A5P0C7T3 313 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 MYL2P10916 166 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 CHRNB1P11230 501 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 RALBP11234 206 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 ACADMP11310 421 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 ATP1B2P14415 290 aaPredicted RBP7.12□□□□□ -1.27
UBE4B-204ENST00000462658 CD1DP15813 335 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 ZNF37AP17032 561 aaPredicted RBP7.12□□□□□ -1.27
UBE4B-204ENST00000462658 ITGB6P18564 788 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 TFEBP19484 476 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 MSH3P20585 1137 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 AKT1P31749 480 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 GRIA3P42263 894 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 GPR1P46091 355 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 ATP6V0D1P61421 351 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 B4GALNT1Q00973 533 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 COL10A1Q03692 680 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 PCLAFQ15004 111 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 CHI3L2Q15782 390 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 TTC31Q49AM3 519 aaPredicted RBP7.12□□□□□ -1.27
UBE4B-204ENST00000462658 PLAG1Q6DJT9 500 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 RAET1GQ6H3X3 334 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 ZYG11AQ6WRX3 759 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 FAM47EQ6ZV65 393 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 DET1Q7L5Y6 550 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 C10orf107Q8IVU9 208 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 DDHD1Q8NEL9 900 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 RAB3IL1Q8TBN0 382 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 CD200R1Q8TD46 325 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 ZNF473Q8WTR7 871 aaKnown RBP7.12□□□□□ -1.27
UBE4B-204ENST00000462658 NAT14Q8WUY8 206 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 EEF1AKMT1Q8WVE0 214 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 INPP5DQ92835 1189 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 GLYATL1Q969I3 302 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 FAM131CQ96AQ9 280 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 LRRC46Q96FV0 321 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 CCDC138Q96M89 665 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 PANX3Q96QZ0 392 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 PITPNM3Q9BZ71 974 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 NSRP1Q9H0G5 558 aaKnown RBP7.12□□□□□ -1.27
UBE4B-204ENST00000462658 ALG9Q9H6U8 611 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 LMAN1LQ9HAT1 526 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 ARHGEF3Q9NR81 526 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 SPATS2LQ9NUQ6 558 aaKnown RBP7.12□□□□□ -1.27
UBE4B-204ENST00000462658 FGFR1OP2Q9NVK5 253 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 MUTYHQ9UIF7 546 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 F5P12259 2224 aa7.12□□□□□ -1.27
UBE4B-204ENST00000462658 TBC1D3DA0A087WVF3 549 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 TBC1D3IA0A087WXS9 549 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 TBC1D3EA0A087X179 549 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 TBC1D3KA0A087X1G2 549 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 TCRBV21S2A2A0A5A6 115 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 TBC1D3FA6NER0 549 aaPredicted RBP7.11□□□□□ -1.27
UBE4B-204ENST00000462658 TBC1D3LB9A6J9 549 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 QSOX1O00391 747 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 INPP4BO15327 924 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 PLRG1O43660 514 aaKnown RBP7.11□□□□□ -1.27
UBE4B-204ENST00000462658 MAGEC1O60732 1142 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 EDF1O60869 148 aaKnown RBP7.11□□□□□ -1.27
UBE4B-204ENST00000462658 AP2A2O94973 939 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 SOD1P00441 154 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 SERPINE1P05121 402 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 IL6RP08887 468 aaPredicted RBP7.11□□□□□ -1.27
UBE4B-204ENST00000462658 TBC1D3HP0C7X1 549 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 FGF3P11487 239 aaPredicted RBP7.11□□□□□ -1.27
UBE4B-204ENST00000462658 HGFP14210 728 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 DGKAP23743 735 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 PCSK6P29122 969 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 RGS4P49798 205 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 PRKAA2P54646 552 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 RPS21P63220 83 aaKnown RBP7.11□□□□□ -1.27
UBE4B-204ENST00000462658 BST1Q10588 318 aa7.11□□□□□ -1.27
UBE4B-204ENST00000462658 TMEM115Q12893 351 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms