RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 DLX5P56178 289 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 RPS15AP62244 130 aaKnown RBP16.1■□□□□ 0.17
TOP3A-202ENST00000461127 KCTD19Q17RG1 926 aaPredicted RBP16.1■□□□□ 0.17
TOP3A-202ENST00000461127 SLC25A35Q3KQZ1 300 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 GXYLT1Q4G148 440 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.1■□□□□ 0.17
TOP3A-202ENST00000461127 TMEM198Q66K66 360 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 TMEM214Q6NUQ4 689 aaKnown RBP16.1■□□□□ 0.17
TOP3A-202ENST00000461127 IFT20Q8IY31 132 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 CYP4Z2PQ8N1L4 340 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 WFDC11Q8NEX6 87 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 OR52N2Q8NGI0 321 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 CREB3L4Q8TEY5 395 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 NUDT8Q8WV74 236 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 NANOS1Q8WY41 292 aaKnown RBP16.1■□□□□ 0.17
TOP3A-202ENST00000461127 TSLPQ969D9 159 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 ZNF778Q96MU6 729 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 SARGQ9BW04 601 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 RBCK1Q9BYM8 510 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 DMGDHQ9UI17 866 aaKnown RBP16.1■□□□□ 0.17
TOP3A-202ENST00000461127 RTTNQ86VV8 2226 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 H7BY64 318 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 RDH16O75452 317 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 RAF1P04049 648 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 RPS3P23396 243 aaKnown RBP eCLIP16.09■□□□□ 0.17
TOP3A-202ENST00000461127 EIF3BP55884 814 aaKnown RBP16.09■□□□□ 0.17
TOP3A-202ENST00000461127 SNRPNP63162 240 aaKnown RBP16.09■□□□□ 0.17
TOP3A-202ENST00000461127 CALCOCO2Q13137 446 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 DEFB113Q30KQ7 82 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 PAMR1Q6UXH9 720 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 B3GNT6Q6ZMB0 384 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 CYP4X1Q8N118 509 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 MPP5Q8N3R9 675 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 TMEM156Q8N614 296 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 CAMKVQ8NCB2 501 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 BBOF1Q8ND07 529 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 SPATA3Q8NHX4 192 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 ZCCHC10Q8TBK6 192 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 THAP11Q96EK4 314 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 SNF8Q96H20 258 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 PEX11GQ96HA9 241 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 PRAP1Q96NZ9 151 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 TTYH2Q9BSA4 534 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 DEFB126Q9BYW3 111 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 DEFB127Q9H1M4 99 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 MARCH4Q9P2E8 410 aaPredicted RBP16.09■□□□□ 0.17
TOP3A-202ENST00000461127 SNX24Q9Y343 169 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 TCAF1Q9Y4C2 921 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 FN1P02751 2386 aaKnown RBP16.09■□□□□ 0.17
TOP3A-202ENST00000461127 VPS13CQ709C8 3753 aa16.09■□□□□ 0.17
TOP3A-202ENST00000461127 KCNE1BA0A087WTH5 132 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 A6NNC1 897 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 FAM47E-STBD1D6RA91 191 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 E7EVH7 732 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 ACOT7O00154 380 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 BCKDKO14874 412 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 PSIP1O75475 530 aaKnown RBP16.08■□□□□ 0.16
TOP3A-202ENST00000461127 SLC16A8O95907 504 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 HEXAP06865 529 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 JAK1P23458 1154 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 HRH2P25021 359 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 FDFT1P37268 417 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 TERF1P54274 439 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 GPR85P60893 370 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 BASP1P80723 227 aaKnown RBP16.08■□□□□ 0.16
TOP3A-202ENST00000461127 MEF2AQ02078 507 aaPredicted RBP16.08■□□□□ 0.16
TOP3A-202ENST00000461127 KEAP1Q14145 624 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 FBXW10Q5XX13 1052 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 DUPD1Q68J44 220 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 ZNF585AQ6P3V2 769 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 VN1R4Q7Z5H5 301 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 SHISA5Q8N114 240 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 OTUD6BQ8N6M0 293 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 PPFIBP2Q8ND30 876 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 PPHLN1Q8NEY8 458 aaKnown RBP16.08■□□□□ 0.16
TOP3A-202ENST00000461127 OR5M9Q8NGP3 310 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 IFT81Q8WYA0 676 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 PKP4Q99569 1192 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 ANKZF1Q9H8Y5 726 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 TIMMDC1Q9NPL8 285 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 RAB6BQ9NRW1 208 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 LANCL2Q9NS86 450 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 PNPLA3Q9NST1 481 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 TMEM184CQ9NVA4 438 aa16.08■□□□□ 0.16
TOP3A-202ENST00000461127 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.07■□□□□ 0.16
TOP3A-202ENST00000461127 ESYT3A0FGR9 886 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 OR14I1A6ND48 311 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 E7ENX8 843 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 H3BMM5 538 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 FHP07954 510 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 RPL21P46778 160 aaKnown RBP16.07■□□□□ 0.16
TOP3A-202ENST00000461127 SKP1P63208 163 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 PLGLB1Q02325 96 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 TAP2Q03519 686 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 WDR53Q7Z5U6 358 aaPredicted RBP16.07■□□□□ 0.16
TOP3A-202ENST00000461127 ZNF480Q8WV37 535 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 TBC1D20Q96BZ9 403 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 ARSGQ96EG1 525 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 LRRC46Q96FV0 321 aa16.07■□□□□ 0.16
TOP3A-202ENST00000461127 MACROD1Q9BQ69 325 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms