RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	TSPYL1	Q9H0U9	437 aa		3	□□□□□ -1.93
FXR1-204	ENST00000461044	DPEP3	Q9H4B8	488 aa		3	□□□□□ -1.93
FXR1-204	ENST00000461044	PIGV	Q9NUD9	493 aa		3	□□□□□ -1.93
FXR1-204	ENST00000461044	DONSON	Q9NYP3	566 aa		3	□□□□□ -1.93
FXR1-204	ENST00000461044	CTNNA3	Q9UI47	895 aa		3	□□□□□ -1.93
FXR1-204	ENST00000461044	KCNJ14	Q9UNX9	436 aa		3	□□□□□ -1.93
FXR1-204	ENST00000461044	FOXA2	Q9Y261	457 aa	Predicted RBP	3	□□□□□ -1.93
FXR1-204	ENST00000461044	TMED3	Q9Y3Q3	217 aa		3	□□□□□ -1.93
FXR1-204	ENST00000461044	GRIP1	Q9Y3R0	1128 aa		3	□□□□□ -1.93
FXR1-204	ENST00000461044	LOXL2	Q9Y4K0	774 aa		3	□□□□□ -1.93
FXR1-204	ENST00000461044	ASB3	Q9Y575	518 aa		3	□□□□□ -1.93
FXR1-204	ENST00000461044	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	3	□□□□□ -1.93
FXR1-204	ENST00000461044	COL2A1	P02458	1487 aa	Predicted RBP	3	□□□□□ -1.93
FXR1-204	ENST00000461044	MRC1	P22897	1456 aa		3	□□□□□ -1.93
FXR1-204	ENST00000461044	COL4A6	Q14031	1691 aa		3	□□□□□ -1.93
FXR1-204	ENST00000461044	MYOM3	Q5VTT5	1437 aa		3	□□□□□ -1.93
FXR1-204	ENST00000461044	USP24	Q9UPU5	2620 aa		3	□□□□□ -1.93
FXR1-204	ENST00000461044	ADGRB1	O14514	1584 aa		3	□□□□□ -1.93
FXR1-204	ENST00000461044	POLR3A	O14802	1390 aa	Predicted RBP	3	□□□□□ -1.93
FXR1-204	ENST00000461044	ZMYM2	Q9UBW7	1377 aa		3	□□□□□ -1.93
FXR1-204	ENST00000461044	PCDH11Y	Q9BZA8	1340 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	TAF1	P21675	1872 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	FAM186A	A6NE01	2351 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	CTAGE9	A4FU28	777 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	KRTAP29-1	A8MX34	341 aa	Predicted RBP	2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	BOLA2-SMG1P6	H3BVE0	249 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	WNT9B	O14905	357 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	KCNAB3	O43448	404 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	ITM2A	O43736	263 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	LANCL1	O43813	399 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	KLHL41	O60662	606 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	CYTIP	O60759	359 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	GMNN	O75496	209 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	RNF8	O76064	485 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	PCCB	P05166	539 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	CHRNG	P07510	517 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	SP9	P0CG40	484 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	ACP2	P11117	423 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	CYP19A1	P11511	503 aa	Predicted RBP	2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	SFTPC	P11686	197 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	IL4R	P24394	825 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	PKLR	P30613	574 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	ALDH1B1	P30837	517 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	SSTR1	P30872	391 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	DUT	P33316	252 aa	Known RBP	2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	OR1D2	P34982	312 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	IER3	P46695	156 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	TRPC1	P48995	793 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	MMP15	P51511	669 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	CLCNKA	P51800	687 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	CTSC	P53634	463 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	FKBP1B	P68106	108 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	IRX4	P78413	519 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	ROR2	Q01974	943 aa	Known RBP	2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	RUNX1T1	Q06455	604 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	ST3GAL1	Q11201	340 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	ABR	Q12979	859 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	TRAF1	Q13077	416 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	MYBPH	Q13203	477 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	ITPK1	Q13572	414 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	TSTA3	Q13630	321 aa	Predicted RBP	2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	GIT2	Q14161	759 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	CA9	Q16790	459 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	UGT3A2	Q3SY77	523 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	NADK2	Q4G0N4	442 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	BOLA3	Q53S33	107 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	STXBP5	Q5T5C0	1151 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	PXDC1	Q5TGL8	231 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	RAD9B	Q6WBX8	426 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044		Q6ZSV7	163 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	TECPR1	Q7Z6L1	1165 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	ZNF573	Q86YE8	665 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	GRAMD2A	Q8IUY3	354 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	STH	Q8IWL8	128 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	GPC2	Q8N158	579 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	THEM5	Q8N1Q8	247 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	ZCCHC7	Q8N3Z6	543 aa	Known RBP	2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	C1orf52	Q8N6N3	182 aa	Known RBP	2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	NEXN-AS1	Q8NBZ9	246 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	ZNF548	Q8NEK5	533 aa	Predicted RBP	2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	OR2T3	Q8NH03	318 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	OR4A16	Q8NH70	328 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	NDN	Q99608	321 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	ZSCAN5A	Q9BUG6	496 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	NTMT1	Q9BV86	223 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	TRIM6	Q9C030	488 aa	Predicted RBP	2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	SLC39A8	Q9C0K1	460 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	SIRPD	Q9H106	197 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	TMEM245	Q9H330	911 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	TRPC7	Q9HCX4	862 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	TM9SF3	Q9HD45	589 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	ACKR4	Q9NPB9	350 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	NOX4	Q9NPH5	578 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	GSN-AS1	Q9NRJ2	163 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	MSRB1	Q9NZV6	116 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	PSORS1C1	Q9UIG5	152 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	SNX6	Q9UNH7	406 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	RUVBL2	Q9Y230	463 aa	Known RBP	2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	SH3GLB1	Q9Y371	365 aa		2.99	□□□□□ -1.93
FXR1-204	ENST00000461044	YIPF1	Q9Y548	306 aa		2.99	□□□□□ -1.93

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