RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 TCEANCQ8N8B7 351 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 OR4E2Q8NGC2 313 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 NCSTNQ92542 709 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 SPATA9Q9BWV2 254 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 MOV10Q9HCE1 1003 aaKnown RBP14.23□□□□□ -0.13
PTPRU-205ENST00000460170 GPN1Q9HCN4 374 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-205ENST00000460170 POLMQ9NP87 494 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-205ENST00000460170 TMEM45AQ9NWC5 275 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 DNAJC27Q9NZQ0 273 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 ACSL5Q9ULC5 683 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 GNB5O14775 395 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 GMFBP60983 142 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 ZDHHC7Q9NXF8 308 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 PRRC2BQ5JSZ5 2229 aaKnown RBP14.23□□□□□ -0.13
PTPRU-205ENST00000460170 MYO5AQ9Y4I1 1855 aaKnown RBP14.23□□□□□ -0.13
PTPRU-205ENST00000460170 UBXN7O94888 489 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 IL3P08700 152 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 FUT4P22083 530 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 AP3S2P59780 193 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 TBPL1P62380 186 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 KCTD11Q693B1 232 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 MARCH9Q86YJ5 346 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 OR6K6Q8NGW6 343 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 TMEM125Q96AQ2 219 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 SLC29A1Q99808 456 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 ANKRD60Q9BZ19 345 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 SLC22A4Q9H015 551 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 EVA1BQ9NVM1 165 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 PCDHGB7Q9Y5F8 929 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 SLC6A4P31645 630 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 GRIA2P42262 883 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 RPS3AP61247 264 aaKnown RBP14.23□□□□□ -0.13
PTPRU-205ENST00000460170 ST3GAL4Q11206 333 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 CYP27C1Q4G0S4 372 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 FAAH2Q6GMR7 532 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 FAM180AQ6UWF9 173 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 ARRDC2Q8TBH0 407 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 MZB1Q8WU39 189 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 TMEM80Q96HE8 168 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 ZFP3Q96NJ6 502 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 DPH2Q9BQC3 489 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-205ENST00000460170 TSSK6Q9BXA6 273 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 CXCL16Q9H2A7 254 aa14.23□□□□□ -0.13
PTPRU-205ENST00000460170 RHPN2P1A8MT19 583 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 RCBTB2O95199 551 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 ACVR2AP27037 513 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 CDH11P55287 796 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 PRPF38BQ5VTL8 546 aaKnown RBP14.22□□□□□ -0.13
PTPRU-205ENST00000460170 SLC8B1Q6J4K2 584 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 PRR23CQ6ZRP0 262 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 FBXO15Q8NCQ5 510 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-205ENST00000460170 MDGA1Q8NFP4 955 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 PXYLP1Q8TE99 480 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 KHSRPQ92945 711 aaKnown RBP eCLIP14.22□□□□□ -0.13
PTPRU-205ENST00000460170 SLC12A9Q9BXP2 914 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 MS4A12Q9NXJ0 267 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 ERVK-18Q9QC07 812 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 MKLN1Q9UL63 735 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 CH25HO95992 272 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 SERPINA3P01011 423 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 LRP8Q14114 963 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 SMU1Q2TAY7 513 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 ARMCX6Q7L4S7 300 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 SLC22A16Q86VW1 577 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 TMA7Q9Y2S6 64 aaKnown RBP14.22□□□□□ -0.13
PTPRU-205ENST00000460170 ZNF140P52738 457 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-205ENST00000460170 RHBDF1Q96CC6 855 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 PCDHGB1Q9Y5G3 927 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 GLOD5A6NK44 160 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 CD9P21926 228 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 BCAP31P51572 246 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 NPRL3Q12980 569 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 MSANTD1Q6ZTZ1 278 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 NANOGNBQ7Z5D8 188 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 GALNT7Q86SF2 657 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 HUS1BQ8NHY5 278 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 SLC2A11Q9BYW1 496 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 ANKRD12Q6UB98 2062 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 COL22A1Q8NFW1 1626 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-205ENST00000460170 TTC34A8MYJ7 566 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 PPP6CO00743 305 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 PRDX3P30048 256 aaKnown RBP14.22□□□□□ -0.13
PTPRU-205ENST00000460170 CENPSQ8N2Z9 138 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 DTWD1Q8N5C7 304 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 METTL21AQ8WXB1 218 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 SORCS1Q8WY21 1168 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 NR4A3Q92570 626 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 NT5C3BQ969T7 300 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 PIP5K1AQ99755 562 aa14.22□□□□□ -0.13
PTPRU-205ENST00000460170 REM1O75628 298 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 ARHGEF15O94989 841 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 MT-ND2P03891 347 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 HLA-DPB1P04440 258 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 GIMD1P0DJR0 217 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 SRCP12931 536 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 CSF2RAP15509 400 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 ADRA1AP35348 466 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 MAP2K4P45985 399 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 ARCN1P48444 511 aaKnown RBP14.21□□□□□ -0.13
PTPRU-205ENST00000460170 KIAA0319Q5VV43 1072 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms