RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 RAB23Q9ULC3 237 aa17.4■□□□□ 0.38
HPS3-202ENST00000460120 SLC6A14Q9UN76 642 aa17.4■□□□□ 0.38
HPS3-202ENST00000460120 RNF6Q9Y252 685 aa17.4■□□□□ 0.38
HPS3-202ENST00000460120 NOTCH4Q99466 2003 aa17.4■□□□□ 0.38
HPS3-202ENST00000460120 A0A0G2JN53 185 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 NPIPB8E9PQR5 432 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 FAM227AF5H4B4 570 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 C1GALT1C1LP0DN25 315 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 TAP2Q03519 686 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 EXOC3L2Q2M3D2 409 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 IQCCQ4KMZ1 466 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 PAGE2BQ5JRK9 111 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 P2RY8Q86VZ1 359 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 ANKRD13BQ86YJ7 626 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 MMAAQ8IVH4 418 aaKnown RBP17.39■□□□□ 0.37
HPS3-202ENST00000460120 PLA2G15Q8NCC3 412 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 APH1BQ8WW43 257 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 TAMM41Q96BW9 452 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 RAD18Q9NS91 495 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 FAIMQ9NVQ4 179 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 SERTM1A2A2V5 107 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 QSOX1O00391 747 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 VEZF1Q14119 521 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 RPS26P11Q5JNZ5 115 aaPredicted RBP17.39■□□□□ 0.37
HPS3-202ENST00000460120 DCDC5Q6ZRR9 648 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 SZRD1Q7Z422 152 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 ADCK1Q86TW2 530 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 OR9A1PQ8NGU1 263 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 SLC5A11Q8WWX8 675 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 VPS35Q96QK1 796 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 ZNF282Q9UDV7 671 aaPredicted RBP17.39■□□□□ 0.37
HPS3-202ENST00000460120 ZNF232Q9UNY5 417 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 PCDHGA6Q9Y5G7 932 aa17.39■□□□□ 0.37
HPS3-202ENST00000460120 PRAMEF25A6NGN4 478 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 SH3BP5O60239 455 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 PTGER1P34995 402 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 LRRC74AQ0VAA2 488 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 PPIGQ13427 754 aaKnown RBP eCLIP17.38■□□□□ 0.37
HPS3-202ENST00000460120 GCNT6Q5T4J0 391 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 EGFLAMQ63HQ2 1017 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 ZNF554Q86TJ5 538 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 OR10G2Q8NGC3 310 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 FBLIM1Q8WUP2 373 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 ROGDIQ9GZN7 287 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 DUSP21Q9H596 190 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 ACOT13Q9NPJ3 140 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 MIEF1Q9NQG6 463 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 NAALAD2Q9Y3Q0 740 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 LYVE1Q9Y5Y7 322 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 FEZF1A0PJY2 475 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 SCAMP1O15126 338 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 FUCA1P04066 466 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 PSMB5P28074 263 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 PCGF2P35227 344 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 SLC19A1P41440 591 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 MVDP53602 400 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 SELENOWP63302 87 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 HIST2H2ACQ16777 129 aaPredicted RBP17.38■□□□□ 0.37
HPS3-202ENST00000460120 PRSS36Q5K4E3 855 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 HIST2H2AA3Q6FI13 130 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 TNFAIP8L2Q6P589 184 aaPredicted RBP17.38■□□□□ 0.37
HPS3-202ENST00000460120 TMC5Q6UXY8 1006 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 COQ8BQ96D53 544 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 SH3YL1Q96HL8 342 aaPredicted RBP17.38■□□□□ 0.37
HPS3-202ENST00000460120 TMEM165Q9HC07 324 aa17.38■□□□□ 0.37
HPS3-202ENST00000460120 CCDC177Q9NQR7 707 aaPredicted RBP17.38■□□□□ 0.37
HPS3-202ENST00000460120 FURINP09958 794 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 CISD3P0C7P0 127 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 HSD3B1P14060 373 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 HSD3B2P26439 372 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 POU1F1P28069 291 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 WASP42768 502 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 ST13P50502 369 aaKnown RBP17.37■□□□□ 0.37
HPS3-202ENST00000460120 MAPK11Q15759 364 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 CYP2A13Q16696 494 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 FAHD1Q6P587 224 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 HMGN2P46Q86SG4 172 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 PLD3Q8IV08 490 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.37■□□□□ 0.37
HPS3-202ENST00000460120 LGI4Q8N135 537 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 STARD8Q92502 1023 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 COX4I2Q96KJ9 171 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 COQ10AQ96MF6 247 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 COPS4Q9BT78 406 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 PCDHGB3Q9Y5G1 929 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 GOLGA4Q13439 2230 aaKnown RBP17.37■□□□□ 0.37
HPS3-202ENST00000460120 RNASET2O00584 256 aaKnown RBP17.37■□□□□ 0.37
HPS3-202ENST00000460120 PCDH17O14917 1159 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 SERPIND1P05546 499 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 CD36P16671 472 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 PNLIPRP1P54315 467 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 TCEA2Q15560 299 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 C11orf96Q7Z7L8 435 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 TSPYL5Q86VY4 417 aaPredicted RBP17.37■□□□□ 0.37
HPS3-202ENST00000460120 ZNF566Q969W8 418 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 GPR83Q9NYM4 423 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 TAS2R16Q9NYV7 291 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 KIAA1671Q9BY89 1806 aa17.37■□□□□ 0.37
HPS3-202ENST00000460120 PRAMEF33A0A0G2JMD5 474 aa17.36■□□□□ 0.37
HPS3-202ENST00000460120 A0A1W2PRB8 838 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms