RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 TM4SF19Q96DZ7 209 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 KCNC2Q96PR1 638 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 DUSP26Q9BV47 211 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 ABCG4Q9H172 646 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 SEMA6CQ9H3T2 930 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 L3MBTL1Q9Y468 752 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 NEUROG3Q9Y4Z2 214 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 SDK1Q7Z5N4 2213 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 SLC35G6P0C7Q6 338 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 GIMD1P0DJR0 217 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 LAMP1P11279 417 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 HSD17B1P14061 328 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 PVRP15151 417 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 EPHA8P29322 1005 aaPredicted RBP23.27■■□□□ 1.32
U2AF1-204ENST00000459639 SSR2P43308 183 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 PLA2G16P53816 162 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 WNT3P56703 355 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 TRIM40Q6P9F5 258 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 ABHD17CQ6PCB6 329 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 ZNF438Q7Z4V0 828 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 ASB9Q96DX5 294 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 PPM1MQ96MI6 270 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 FCRL4Q96PJ5 515 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 C17orf62Q9BQA9 187 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 PAIP1Q9H074 479 aaKnown RBP23.27■■□□□ 1.32
U2AF1-204ENST00000459639 KLHL31Q9H511 634 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 ATAD3AQ9NVI7 634 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 PRDM4Q9UKN5 801 aa23.27■■□□□ 1.32
U2AF1-204ENST00000459639 A0A0A6YYD5 115 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 A0A0J9YVX5 310 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 A0A1B0GTQ1 180 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 RHPN2P1A8MT19 583 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 ERI3O43414 337 aaKnown RBP23.26■■□□□ 1.31
U2AF1-204ENST00000459639 SCN2BO60939 215 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 LMNAP02545 664 aaKnown RBP23.26■■□□□ 1.31
U2AF1-204ENST00000459639 STATHP02808 62 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 IL3P08700 152 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 TRPC1P48995 793 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 EEFSECP57772 596 aaKnown RBP23.26■■□□□ 1.31
U2AF1-204ENST00000459639 PLIN5Q00G26 463 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 KLC1Q07866 573 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 TGM3Q08188 693 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 LRRC74AQ0VAA2 488 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 DUOXA1Q1HG43 343 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 RABL3Q5HYI8 236 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 ANXA8L1Q5VT79 327 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 STMN2Q93045 179 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 GAL3ST3Q96A11 431 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 ANKRD27Q96NW4 1050 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 TEFMQ96QE5 360 aaKnown RBP23.26■■□□□ 1.31
U2AF1-204ENST00000459639 TBCDQ9BTW9 1192 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 BHLHE41Q9C0J9 482 aaPredicted RBP23.26■■□□□ 1.31
U2AF1-204ENST00000459639 KLHL25Q9H0H3 589 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 VAPAQ9P0L0 249 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 BCAP29Q9UHQ4 241 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 BTBD3Q9Y2F9 522 aa23.26■■□□□ 1.31
U2AF1-204ENST00000459639 TRBV5-3A0A0A0MS03 114 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 YKT6O15498 198 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 NUDT21O43809 227 aaKnown RBP23.25■■□□□ 1.31
U2AF1-204ENST00000459639 TRIM25Q14258 630 aaKnown RBP23.25■■□□□ 1.31
U2AF1-204ENST00000459639 ANKRD26P1Q6NSI1 321 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 ANKRD46Q86W74 232 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 ZBTB44Q8NCP5 570 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 VPS37AQ8NEZ2 397 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 PPCDCQ96CD2 204 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 TM4SF18Q96CE8 201 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 MACROD1Q9BQ69 325 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 BTNL2Q9UIR0 455 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 RNF215Q9Y6U7 377 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 GOLGA4Q13439 2230 aaKnown RBP23.25■■□□□ 1.31
U2AF1-204ENST00000459639 RFXANKO14593 260 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 TMPRSS11DO60235 418 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 DFNA5O60443 496 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 DNAJA2O60884 412 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 HOXB9P17482 250 aaPredicted RBP23.25■■□□□ 1.31
U2AF1-204ENST00000459639 TCN1P20061 433 aaPredicted RBP23.25■■□□□ 1.31
U2AF1-204ENST00000459639 CDH3P22223 829 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 TRAP1Q12931 704 aaKnown RBP23.25■■□□□ 1.31
U2AF1-204ENST00000459639 FLOT2Q14254 428 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 SNCBQ16143 134 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 DNAJC14Q6Y2X3 702 aaPredicted RBP23.25■■□□□ 1.31
U2AF1-204ENST00000459639 ZNF793Q6ZN11 406 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 KANSL1Q7Z3B3 1105 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 SLC35F3Q8IY50 421 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 CAMKVQ8NCB2 501 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 FAM156AQ8NDB6 213 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 CEP76Q8TAP6 659 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 RERGQ96A58 199 aaPredicted RBP23.25■■□□□ 1.31
U2AF1-204ENST00000459639 RAB33BQ9H082 229 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 PRDM7Q9NQW5 492 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 NLGN3Q9NZ94 848 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 SH3BP4Q9P0V3 963 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 LRIT1Q9P2V4 623 aa23.25■■□□□ 1.31
U2AF1-204ENST00000459639 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.25■■□□□ 1.31
U2AF1-204ENST00000459639 BDP1A6H8Y1 2624 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 PRSS51A0A1B0GVH4 220 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 C4orf51C9J302 202 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 ACOT8O14734 319 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 TBX19O60806 448 aa23.24■■□□□ 1.31
U2AF1-204ENST00000459639 BCAS2O75934 225 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms