RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 COQ10AQ96MF6 247 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 C5orf34Q96MH7 638 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 WDR92Q96MX6 357 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 CSPG4P5Q96PW8 444 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 PCDHB18PQ96TA0 734 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 GAD1Q99259 594 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 PIGQQ9BRB3 760 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 CENPKQ9BS16 269 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 ANGPTL4Q9BY76 406 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 P2RY12Q9H244 342 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 GAL3ST2Q9H3Q3 398 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 ADAP2Q9NPF8 381 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 ASCL3Q9NQ33 180 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 TREX1Q9NSU2 369 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 PAG1Q9NWQ8 432 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 HIF1ANQ9NWT6 349 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 UVRAGQ9P2Y5 699 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 DKK4Q9UBT3 224 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 SERGEFQ9UGK8 458 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 AMFRQ9UKV5 643 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 SARDHQ9UL12 918 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 LIPGQ9Y5X9 500 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 DICER1Q9UPY3 1922 aaKnown RBP5.2□□□□□ -1.58
VPS41-209ENST00000457055 TIAM2Q8IVF5 1701 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 ARHGEF35A5YM69 484 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 ZNF233A6NK53 670 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 H7C0C1 242 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 TRIM77I1YAP6 450 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 CES2O00748 559 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 CLDN4O14493 209 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 TOR1AO14656 332 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 GRID2O43424 1007 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 TNFSF14O43557 240 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 DNPH1O43598 174 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 DFNA5O60443 496 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 ATG13O75143 517 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 VPS26AO75436 327 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 NDUFS3O75489 264 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 CCNKO75909 580 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 UNC5CO95185 931 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 OR2C1O95371 312 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 FGBP02675 491 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 FCER2P06734 321 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 MMP10P09238 476 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 CTXN2P0C2S0 81 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 TMEM191BP0C7N4 346 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 CYP4B1P13584 511 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 CBR1P16152 277 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 EN2P19622 333 aaPredicted RBP5.19□□□□□ -1.58
VPS41-209ENST00000457055 ITGALP20701 1170 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 MAGP20916 626 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 CMA1P23946 247 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 CD27P26842 260 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 PON1P27169 355 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 PSMB6P28072 239 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 HSD11B1P28845 292 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 CASP14P31944 242 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 PHBP35232 272 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 SLC1A2P43004 574 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 RPS5P46782 204 aaKnown RBP5.19□□□□□ -1.58
VPS41-209ENST00000457055 ERFP50548 548 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 CDK9P50750 372 aaKnown RBP5.19□□□□□ -1.58
VPS41-209ENST00000457055 P2RY4P51582 365 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 RIDAP52758 137 aaKnown RBP5.19□□□□□ -1.58
VPS41-209ENST00000457055 RABGGTBP53611 331 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 MFAP4P55083 255 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 RGS8P57771 180 aaPredicted RBP5.19□□□□□ -1.58
VPS41-209ENST00000457055 DAOAP59103 153 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 VSNL1P62760 191 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 NKX6-1P78426 367 aaPredicted RBP5.19□□□□□ -1.58
VPS41-209ENST00000457055 GALK2Q01415 458 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 STX3Q13277 289 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 ATP1A4Q13733 1029 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 VEZF1Q14119 521 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 NPTX1Q15818 432 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.19□□□□□ -1.58
VPS41-209ENST00000457055 TMEM44Q2T9K0 475 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 GOLGA7BQ2TAP0 167 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 UGT3A2Q3SY77 523 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 CCNYL2Q5T2Q4 361 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 C20orf194Q5TEA3 1177 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 BSPRYQ5W0U4 402 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 ZNF470Q6ECI4 717 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 ARMCX5Q6P1M9 558 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 SYT13Q7L8C5 426 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 SLC26A9Q7LBE3 791 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 MRGPREQ86SM8 312 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 CLEC14AQ86T13 490 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 HORMAD1Q86X24 394 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 VSTM4Q8IW00 320 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 PDIK1LQ8N165 341 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 ELMOD1Q8N336 334 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 C12orf29Q8N999 325 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 STKLD1Q8NE28 680 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 OR4K14Q8NGD5 310 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 OR13F1Q8NGS4 319 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 GLYATL2Q8WU03 294 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 SNX19Q92543 992 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 PHYHIPQ92561 330 aa5.19□□□□□ -1.58
VPS41-209ENST00000457055 AKAP1Q92667 903 aaKnown RBP eCLIP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms