RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 LEXMQ3ZCV2 418 aa9.91□□□□□ -0.82
CLIP4-208ENST00000456385 C10orf120Q5SQS8 335 aa9.91□□□□□ -0.82
CLIP4-208ENST00000456385 CREB3L2Q70SY1 520 aa9.91□□□□□ -0.82
CLIP4-208ENST00000456385 SYT12Q8IV01 421 aa9.91□□□□□ -0.82
CLIP4-208ENST00000456385 TTC9BQ8N6N2 239 aa9.91□□□□□ -0.82
CLIP4-208ENST00000456385 BTN2A2Q8WVV5 523 aa9.91□□□□□ -0.82
CLIP4-208ENST00000456385 BHMTQ93088 406 aa9.91□□□□□ -0.82
CLIP4-208ENST00000456385 SLC25A46Q96AG3 418 aa9.91□□□□□ -0.82
CLIP4-208ENST00000456385 ZIC5Q96T25 663 aa9.91□□□□□ -0.82
CLIP4-208ENST00000456385 FAM129BQ96TA1 746 aa9.91□□□□□ -0.82
CLIP4-208ENST00000456385 C11orf16Q9NQ32 467 aa9.91□□□□□ -0.82
CLIP4-208ENST00000456385 MARCH2Q9P0N8 246 aa9.91□□□□□ -0.82
CLIP4-208ENST00000456385 RHCGQ9UBD6 479 aa9.91□□□□□ -0.82
CLIP4-208ENST00000456385 NLKQ9UBE8 527 aa9.91□□□□□ -0.82
CLIP4-208ENST00000456385 PLEKHB1Q9UF11 243 aaPredicted RBP9.91□□□□□ -0.82
CLIP4-208ENST00000456385 SCML2Q9UQR0 700 aa9.91□□□□□ -0.82
CLIP4-208ENST00000456385 ITM2BQ9Y287 266 aa9.91□□□□□ -0.82
CLIP4-208ENST00000456385 SH3BGRLO75368 114 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 GASTP01350 101 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 IGFBP1P08833 259 aaPredicted RBP9.9□□□□□ -0.82
CLIP4-208ENST00000456385 ALPIP09923 528 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 RPL9P32969 192 aaKnown RBP9.9□□□□□ -0.82
CLIP4-208ENST00000456385 CSTF2P33240 577 aaKnown RBP eCLIP9.9□□□□□ -0.82
CLIP4-208ENST00000456385 RGS4P49798 205 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 MAPK12P53778 367 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 RAB25P57735 213 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 GAB1Q13480 694 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 C22orf42Q6IC83 251 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 ANGPTL8Q6UXH0 198 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 TMIGD1Q6UXZ0 262 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 ZNF767PQ75MW2 155 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 ZNF598Q86UK7 904 aaKnown RBP9.9□□□□□ -0.82
CLIP4-208ENST00000456385 THEM5Q8N1Q8 247 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 CPA6Q8N4T0 437 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 OR8H1Q8NGG4 311 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 UPRTQ96BW1 309 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 ZBED6CLQ96FA7 236 aaPredicted RBP9.9□□□□□ -0.82
CLIP4-208ENST00000456385 SLC29A3Q9BZD2 475 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 POLR2J2Q9GZM3 115 aaKnown RBP9.9□□□□□ -0.82
CLIP4-208ENST00000456385 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.9□□□□□ -0.82
CLIP4-208ENST00000456385 CHST8Q9H2A9 424 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 CNOT2Q9NZN8 540 aaKnown RBP9.9□□□□□ -0.82
CLIP4-208ENST00000456385 DNAJC27Q9NZQ0 273 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 PCDH10Q9P2E7 1040 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 STUB1Q9UNE7 303 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 PCDHB11Q9Y5F2 797 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 PPP2R3BQ9Y5P8 575 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 MYO16Q9Y6X6 1858 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 HYKKA2RU49 373 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 WASHC1A8K0Z3 465 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 CBX4O00257 560 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 CXCL11O14625 94 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 SEC14L5O43304 696 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 PRAMEF4O60810 478 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 TNFRSF21O75509 655 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 CTSHP09668 335 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 C1SP09871 688 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 DDX5P17844 614 aaKnown RBP9.9□□□□□ -0.82
CLIP4-208ENST00000456385 PRPS1L1P21108 318 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 ENPP1P22413 925 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 DGKAP23743 735 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 CACNG1Q06432 222 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 TWF1Q12792 350 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 RGNQ15493 299 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 TRIM71Q2Q1W2 868 aaKnown RBP9.9□□□□□ -0.82
CLIP4-208ENST00000456385 PRAMEF9Q5VWM5 478 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 TIGD3Q6B0B8 471 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 KLHL17Q6TDP4 642 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 LINGO4Q6UY18 593 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 SLC51BQ86UW2 128 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 GPR65Q8IYL9 337 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 ADGRG2Q8IZP9 1017 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 STK40Q8N2I9 435 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 GDPD1Q8N9F7 314 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 AQP11Q8NBQ7 271 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 OR9Q1Q8NGQ5 310 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 CMTM7Q96FZ5 175 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 TCF25Q9BQ70 676 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 CRISPLD1Q9H336 500 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 NIPAL2Q9H841 368 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 TRIM45Q9H8W5 580 aaPredicted RBP9.9□□□□□ -0.82
CLIP4-208ENST00000456385 GALNT9Q9HCQ5 603 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 CLN6Q9NWW5 311 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 IL17CQ9P0M4 197 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 SEC14L4Q9UDX3 406 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 YARS2Q9Y2Z4 477 aaKnown RBP9.9□□□□□ -0.82
CLIP4-208ENST00000456385 SNX11Q9Y5W9 270 aa9.9□□□□□ -0.82
CLIP4-208ENST00000456385 PTPRDP23468 1912 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 PLXNA4Q9HCM2 1894 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 SH3D21A4FU49 640 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 H7C0S8 307 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 M0QZQ0 153 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 PLOD3O60568 738 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 TPST2O60704 377 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 PRAMEF1O95521 474 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 IGHA2P01877 340 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 F11P03951 625 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 ZNF250P15622 560 aa9.89□□□□□ -0.83
CLIP4-208ENST00000456385 ZNF7P17097 686 aaPredicted RBP9.89□□□□□ -0.83
CLIP4-208ENST00000456385 TACR2P21452 398 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms