RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 PHF21BQ96EK2 531 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 MESP1Q9BRJ9 268 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 NTMT1Q9BV86 223 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 TMEM109Q9BVC6 243 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 VN1R1Q9GZP7 353 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 SLC25A18Q9H1K4 315 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 LANCL2Q9NS86 450 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 FBXL4Q9UKA2 621 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 PPT2Q9UMR5 302 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 PIEZO2Q9H5I5 2752 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 SCN3AQ9NY46 2000 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 ANKDD1BA6NHY2 528 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 FOXO6A8MYZ6 492 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 JRKO75564 520 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 PRB1P04280 392 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 COX6A1P12074 109 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 HPDP32754 393 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-205ENST00000454542 HERVK_113P63132 956 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 RBBP7Q16576 425 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 HIST2H2ACQ16777 129 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-205ENST00000454542 TUBB8Q3ZCM7 444 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 HIST2H2AA3Q6FI13 130 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 TCTN3Q6NUS6 607 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 ABHD17CQ6PCB6 329 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 ZNF843Q8N446 348 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 OR11G2Q8NGC1 345 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 C9orf43Q8TAL5 461 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-205ENST00000454542 WDR20Q8TBZ3 569 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 ABHD17AQ96GS6 310 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 FER1L6-AS2Q96M78 137 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 NSUN5Q96P11 429 aaKnown RBP13.38□□□□□ -0.27
HDAC4-205ENST00000454542 TMEM237Q96Q45 408 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 ERVK-6Q9BXR3 956 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 ROPN1BQ9BZX4 212 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-205ENST00000454542 REXO4Q9GZR2 422 aaKnown RBP13.38□□□□□ -0.27
HDAC4-205ENST00000454542 IPPKQ9H8X2 491 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 ACTR8Q9H981 624 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 ROPN1Q9HAT0 212 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-205ENST00000454542 DMRT3Q9NQL9 472 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 ACSS2Q9NR19 701 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 DCDC2Q9UHG0 476 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 ADGRE2Q9UHX3 823 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 ANGPTL3Q9Y5C1 460 aa13.38□□□□□ -0.27
HDAC4-205ENST00000454542 SMIM23A6NLE4 172 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 MKRN2OSH3BPM6 223 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 PEX12O00623 359 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 ERI3O43414 337 aaKnown RBP13.37□□□□□ -0.27
HDAC4-205ENST00000454542 DLX3O60479 287 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 DNAJB6O75190 326 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 ALOX12BO75342 701 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 PROCP04070 461 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 FHP07954 510 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 ACPPP15309 386 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 KRT15P19012 456 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 TAC1P20366 129 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 ATP5F1P24539 256 aaPredicted RBP13.37□□□□□ -0.27
HDAC4-205ENST00000454542 CRHR1P34998 444 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 PIK3CBP42338 1070 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 EMP2P54851 167 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 RAB8AP61006 207 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 RHAGQ02094 409 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 ZNF678Q5SXM1 525 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 UBE3DQ7Z6J8 389 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 TRABD2AQ86V40 505 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 PRSS58Q8IYP2 241 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 CA13Q8N1Q1 262 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 L3HYPDHQ96EM0 354 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 NPLQ9BXD5 320 aaPredicted RBP13.37□□□□□ -0.27
HDAC4-205ENST00000454542 NOL11Q9H8H0 719 aaKnown RBP13.37□□□□□ -0.27
HDAC4-205ENST00000454542 PCDHGB7Q9Y5F8 929 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 PCDHGA11Q9Y5H2 935 aa13.37□□□□□ -0.27
HDAC4-205ENST00000454542 IGHV1-45A0A0A0MS14 117 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 A0A1B0GTL3 188 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 G3V2L1 256 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 CHST10O43529 356 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 PLIN3O60664 434 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 CLDN9O95484 217 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 HPP00738 406 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 PDGFAP04085 211 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 HEXBP07686 556 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 CCNG1P51959 295 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 ARFIP1P53367 373 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 PRKAA2P54646 552 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 OLR1P78380 273 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 PCOLCEQ15113 449 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 CCDC153Q494R4 210 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 TMEM35AQ53FP2 167 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 LACTB2Q53H82 288 aaPredicted RBP13.36□□□□□ -0.27
HDAC4-205ENST00000454542 UNC50Q53HI1 259 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 C10orf62Q5T681 223 aaPredicted RBP13.36□□□□□ -0.27
HDAC4-205ENST00000454542 TRIM40Q6P9F5 258 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 ZYG11AQ6WRX3 759 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 ZNF793Q6ZN11 406 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 QSOX2Q6ZRP7 698 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 SLC22A9Q8IVM8 553 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 PLPP5Q8NEB5 264 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 FDCSPQ8NFU4 85 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 HUS1BQ8NHY5 278 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 ADAMTS18Q8TE60 1221 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 CCT6BQ92526 530 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms