RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 PRSS41Q7RTY9 318 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 TBC1D19Q8N5T2 526 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 AMER3Q8N944 861 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 OR9A4Q8NGU2 314 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 STT3BQ8TCJ2 826 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 TRPC4APQ8TEL6 797 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 SLC13A3Q8WWT9 602 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 ATP6V1E2Q96A05 226 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 MOCOSQ96EN8 888 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 PAIP2Q9BPZ3 127 aaKnown RBP13.9□□□□□ -0.18
VPS16-205ENST00000453689 TRIM55Q9BYV6 548 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 SOX17Q9H6I2 414 aaPredicted RBP13.9□□□□□ -0.18
VPS16-205ENST00000453689 ACTR8Q9H981 624 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 SEMA4BQ9NPR2 832 aaPredicted RBP13.9□□□□□ -0.18
VPS16-205ENST00000453689 ACSS2Q9NR19 701 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 ZNF282Q9UDV7 671 aaPredicted RBP13.9□□□□□ -0.18
VPS16-205ENST00000453689 TUBD1Q9UJT1 453 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 NXT1Q9UKK6 140 aaKnown RBP13.9□□□□□ -0.18
VPS16-205ENST00000453689 SMG1Q96Q15 3661 aaKnown RBP13.89□□□□□ -0.19
VPS16-205ENST00000453689 IGLV3-12A0A075B6K2 115 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 WDR91A4D1P6 747 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 H3BQF6 201 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 FFAR3O14843 346 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 GPR42O15529 346 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 NDUFS4O43181 175 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 NPHS1O60500 1241 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 PRAMEF4O60810 478 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 DNAJB5O75953 348 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 WFS1O76024 890 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 OTCP00480 354 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 ZGLP1P0C6A0 271 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 TSPAN8P19075 237 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 AHRP35869 848 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 SERPINB5P36952 375 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 ARL1P40616 181 aaPredicted RBP13.89□□□□□ -0.19
VPS16-205ENST00000453689 OCA2Q04671 838 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 TRAF3Q13114 568 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 LAPTM5Q13571 262 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 PRAMEF9Q5VWM5 478 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 LIPJQ5W064 366 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 GRHL2Q6ISB3 625 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 PPP1R32Q7Z5V6 425 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 MRGPREQ86SM8 312 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 KRT78Q8N1N4 520 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 ZNF843Q8N446 348 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 ANKRD53Q8N9V6 530 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 OR52B6Q8NGF0 335 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 OR6Y1Q8NGX8 325 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 PPP1R14CQ8TAE6 165 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 ZCCHC10Q8TBK6 192 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 MAGEB10Q96LZ2 347 aaPredicted RBP13.89□□□□□ -0.19
VPS16-205ENST00000453689 ZNF382Q96SR6 550 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 TRMOQ9BU70 441 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 NTMT1Q9BV86 223 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 PITHD1Q9GZP4 211 aaPredicted RBP13.89□□□□□ -0.19
VPS16-205ENST00000453689 ING2Q9H160 280 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 ZFP69BQ9UJL9 534 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 PIEZO2Q9H5I5 2752 aa13.89□□□□□ -0.19
VPS16-205ENST00000453689 NSA2O95478 260 aaKnown RBP13.88□□□□□ -0.19
VPS16-205ENST00000453689 CLDN9O95484 217 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 SERPINE1P05121 402 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 SERPIND1P05546 499 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 NEFHP12036 1026 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 CHN1P15882 459 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 IL1RNP18510 177 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 CD22P20273 847 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 MMP11P24347 488 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 HNF4AP41235 474 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 AVPR1BP47901 424 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 PKNOX1P55347 436 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 KLC1Q07866 573 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 PWP1Q13610 501 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 RCN2Q14257 317 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 RBBP5Q15291 538 aaKnown RBP13.88□□□□□ -0.19
VPS16-205ENST00000453689 CHI3L2Q15782 390 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 HIST2H2ACQ16777 129 aaPredicted RBP13.88□□□□□ -0.19
VPS16-205ENST00000453689 SYT16Q17RD7 645 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 GGTA1PQ4G0N0 100 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 VWA2Q5GFL6 755 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 HIST2H2AA3Q6FI13 130 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 ZCCHC23Q6ZST2 131 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 MED25Q71SY5 747 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 MILR1Q7Z6M3 343 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 MYLK4Q86YV6 388 aaPredicted RBP13.88□□□□□ -0.19
VPS16-205ENST00000453689 PRSS58Q8IYP2 241 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 L3MBTL4Q8NA19 623 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 NT5CQ8TCD5 201 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 UBE2E3Q969T4 207 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 MIEF2Q96C03 454 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 ABHD17AQ96GS6 310 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 CNDP1Q96KN2 507 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 IP6K3Q96PC2 410 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 CRB3Q9BUF7 120 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 YIPF2Q9BWQ6 316 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 SLC25A18Q9H1K4 315 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 NT5DC2Q9H857 520 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 MKKSQ9NPJ1 570 aaPredicted RBP13.88□□□□□ -0.19
VPS16-205ENST00000453689 TRPC4Q9UBN4 977 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 MAP4K5Q9Y4K4 846 aa13.88□□□□□ -0.19
VPS16-205ENST00000453689 CPAMD8Q8IZJ3 1885 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms