RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 UCNP55089 124 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 ARF3P61204 181 aaPredicted RBP1.47□□□□□ -2.17
LRCH3-209ENST00000452660 ARF1P84077 181 aaKnown RBP1.47□□□□□ -2.17
LRCH3-209ENST00000452660 DUSP5Q16690 384 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 TIMM50Q3ZCQ8 353 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 TMEM211Q6ICI0 200 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 ZNF530Q6P9A1 599 aaPredicted RBP1.47□□□□□ -2.17
LRCH3-209ENST00000452660 MMS22LQ6ZRQ5 1243 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 UNC5CLQ8IV45 518 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 ZNF595Q8IYB9 648 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 MINDY1Q8N5J2 469 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 ZNF525Q8N782 197 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 GBP7Q8N8V2 638 aaPredicted RBP1.47□□□□□ -2.17
LRCH3-209ENST00000452660 OR4Q3Q8NH05 313 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 RPLP0P6Q8NHW5 317 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 U2AF1L4Q8WU68 220 aaKnown RBP1.47□□□□□ -2.17
LRCH3-209ENST00000452660 NABP1Q96AH0 204 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 IL12RB2Q99665 862 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 CCDC3Q9BQI4 270 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 MAK16Q9BXY0 300 aaKnown RBP1.47□□□□□ -2.17
LRCH3-209ENST00000452660 PNNQ9H307 717 aaKnown RBP1.47□□□□□ -2.17
LRCH3-209ENST00000452660 SYNCQ9H7C4 482 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 CDH20Q9HBT6 801 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 KCNMB3Q9NPA1 279 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 CUTCQ9NTM9 273 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 GDE1Q9NZC3 331 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 PILRBQ9UKJ0 227 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 TET3O43151 1660 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 PLCH1Q4KWH8 1693 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 PTCH1Q13635 1447 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 MIA2Q96PC5 1412 aa1.47□□□□□ -2.17
LRCH3-209ENST00000452660 CHD2O14647 1828 aaKnown RBP1.47□□□□□ -2.17
LRCH3-209ENST00000452660 SLIT2O94813 1529 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 ARHGAP5Q13017 1502 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 GPATCH8Q9UKJ3 1502 aaKnown RBP1.46□□□□□ -2.18
LRCH3-209ENST00000452660 CTTNBP2Q8WZ74 1663 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 ADAMTS7Q9UKP4 1686 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 PZPP20742 1482 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 NUP153P49790 1475 aaKnown RBP1.46□□□□□ -2.18
LRCH3-209ENST00000452660 MYOM2P54296 1465 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 MLH3Q9UHC1 1453 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 PTGES3LE9PB15 166 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 CTDSP2O14595 271 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 ADAMDEC1O15204 470 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 SAP30O75446 220 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 AGR2O95994 175 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 RPLP0P05388 317 aaKnown RBP1.46□□□□□ -2.18
LRCH3-209ENST00000452660 YES1P07947 543 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 UMPSP11172 480 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 CD59P13987 128 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 HADHAP40939 763 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 MATKP42679 507 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 SLC1A4P43007 532 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 MATR3P43243 847 aaKnown RBP eCLIP1.46□□□□□ -2.18
LRCH3-209ENST00000452660 WNT4P56705 351 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 VEZF1Q14119 521 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 ALFQ53S48 1182 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 NHLRC3Q5JS37 347 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 HAUS3Q68CZ6 603 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 CPEB2Q7Z5Q1 589 aaKnown RBP1.46□□□□□ -2.18
LRCH3-209ENST00000452660 TCEANCQ8N8B7 351 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 UCMAQ8WVF2 138 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 NUS1Q96E22 293 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 KLHL5Q96PQ7 755 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 PAFAH2Q99487 392 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 PAPOLGQ9BWT3 736 aaKnown RBP1.46□□□□□ -2.18
LRCH3-209ENST00000452660 ANKZF1Q9H8Y5 726 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 MYNNQ9NPC7 610 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 PIH1D3Q9NQM4 214 aaKnown RBP1.46□□□□□ -2.18
LRCH3-209ENST00000452660 GIMAP4Q9NUV9 329 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 PRMT7Q9NVM4 692 aaPredicted RBP1.46□□□□□ -2.18
LRCH3-209ENST00000452660 C9orf78Q9NZ63 289 aaPredicted RBP1.46□□□□□ -2.18
LRCH3-209ENST00000452660 THYN1Q9P016 225 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 IL17CQ9P0M4 197 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 SENP1Q9P0U3 644 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 CRNNQ9UBG3 495 aaPredicted RBP1.46□□□□□ -2.18
LRCH3-209ENST00000452660 UBQLN2Q9UHD9 624 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 MKI67P46013 3256 aaKnown RBP1.46□□□□□ -2.18
LRCH3-209ENST00000452660 MROH1Q8NDA8 1641 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 PLXNC1O60486 1568 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 CDC42BPBQ9Y5S2 1711 aa1.46□□□□□ -2.18
LRCH3-209ENST00000452660 ABCC3O15438 1527 aa1.45□□□□□ -2.18
LRCH3-209ENST00000452660 LMTK2Q8IWU2 1503 aa1.45□□□□□ -2.18
LRCH3-209ENST00000452660 CROCC2H7BZ55 1655 aa1.45□□□□□ -2.18
LRCH3-209ENST00000452660 NKTRP30414 1462 aaKnown RBP1.45□□□□□ -2.18
LRCH3-209ENST00000452660 NLRP1Q9C000 1473 aa1.45□□□□□ -2.18
LRCH3-209ENST00000452660 ARHGAP35Q9NRY4 1499 aa1.45□□□□□ -2.18
LRCH3-209ENST00000452660 BRCA2P51587 3418 aa1.45□□□□□ -2.18
LRCH3-209ENST00000452660 USP32Q8NFA0 1604 aa1.45□□□□□ -2.18
LRCH3-209ENST00000452660 COL22A1Q8NFW1 1626 aaPredicted RBP1.45□□□□□ -2.18
LRCH3-209ENST00000452660 J3KRW8 73 aa1.45□□□□□ -2.18
LRCH3-209ENST00000452660 E2F3O00716 465 aa1.45□□□□□ -2.18
LRCH3-209ENST00000452660 PTP4A3O75365 173 aa1.45□□□□□ -2.18
LRCH3-209ENST00000452660 ATP6AP2O75787 350 aa1.45□□□□□ -2.18
LRCH3-209ENST00000452660 VENTXO95231 258 aa1.45□□□□□ -2.18
LRCH3-209ENST00000452660 LYPD3O95274 346 aa1.45□□□□□ -2.18
LRCH3-209ENST00000452660 SEMA4FO95754 770 aa1.45□□□□□ -2.18
LRCH3-209ENST00000452660 BAG3O95817 575 aa1.45□□□□□ -2.18
LRCH3-209ENST00000452660 CD4P01730 458 aa1.45□□□□□ -2.18
LRCH3-209ENST00000452660 CSN3P07498 182 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms