RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 IL1RNP18510 177 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 MYL12AP19105 171 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 DGKQP52824 942 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 ELP6Q0PNE2 266 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 TAF10Q12962 218 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 PTPRNQ16849 979 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 ATG9BQ674R7 924 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 WDR48Q8TAF3 677 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 ZNF675Q8TD23 568 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 C2orf15Q8WU43 125 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 ASB12Q8WXK4 309 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 RPRD1AQ96P16 312 aaPredicted RBP12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 LOC285095A0A1B0GVY8 99 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 CXCR6O00574 342 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 FZD6O60353 706 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 FCER2P06734 321 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 LPOP22079 712 aaPredicted RBP12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 KCNC1P48547 511 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 LAPTM4AQ15012 233 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 TAF1AQ15573 450 aaPredicted RBP12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 TSNQ15631 228 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 XKR7Q5GH72 579 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 CLLU1Q5K131 121 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 FBXL22Q6P050 247 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 ERICH5Q6P6B1 374 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 FAM131AQ6UXB0 335 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 DET1Q7L5Y6 550 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 GLT6D1Q7Z4J2 308 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 PIM3Q86V86 326 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 PHYKPLQ8IUZ5 450 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 LAX1Q8IWV1 398 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 HMCESQ96FZ2 354 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 SIGLEC11Q96RL6 698 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 GFM1Q96RP9 751 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 HNRNPCL2B2RXH8 293 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 ADAM12O43184 909 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 SULT1B1O43704 296 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 ESR1P03372 595 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 RAF1P04049 648 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 HNF1BP35680 557 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 TRIM23P36406 574 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 RGS6P49758 472 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 RRAS2P62070 204 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 CSTF3Q12996 717 aaKnown RBP12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 FGFBP1Q14512 234 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 TBCEQ15813 527 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 AP5B1Q2VPB7 878 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 ZNF789Q5FWF6 425 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 PDZK1Q5T2W1 519 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 SLC8B1Q6J4K2 584 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 RASGRP3Q8IV61 690 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 OR7G3Q8NG95 312 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 NLE1Q9NVX2 485 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 MAPRE3Q9UPY8 281 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 OBSL1O75147 1896 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 RPS10-NUDT3A0A1W2PQS6 291 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 J3KR12 359 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 FKTNO75072 461 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 MAOBP27338 520 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 VEGFBP49765 207 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 IKZF1Q13422 519 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 OR4D1Q15615 310 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 TUSC1Q2TAM9 212 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 TIMM50Q3ZCQ8 353 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 GPR139Q6DWJ6 353 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 LRFN4Q6PJG9 635 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 TTC29Q8NA56 475 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 INTS12Q96CB8 462 aaKnown RBP12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 CDKN2AIPNLQ96HQ2 116 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 PRM3Q9NNZ6 103 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 FAM50BQ9Y247 325 aa12.96□□□□□ -0.33
SYNGAP1-204ENST00000449372 S100A6P06703 90 aa12.96□□□□□ -0.34
SYNGAP1-204ENST00000449372 CYP4F2P78329 520 aa12.96□□□□□ -0.34
SYNGAP1-204ENST00000449372 EFEMP1Q12805 493 aa12.96□□□□□ -0.34
SYNGAP1-204ENST00000449372 PROX2Q3B8N5 592 aa12.96□□□□□ -0.34
SYNGAP1-204ENST00000449372 TTLL9Q3SXZ7 439 aa12.96□□□□□ -0.34
SYNGAP1-204ENST00000449372 SAXO2Q658L1 398 aa12.96□□□□□ -0.34
SYNGAP1-204ENST00000449372 PAQR3Q6TCH7 311 aa12.96□□□□□ -0.34
SYNGAP1-204ENST00000449372 ANKRD33Q7Z3H0 272 aa12.96□□□□□ -0.34
SYNGAP1-204ENST00000449372 PGBD5Q8N414 524 aa12.96□□□□□ -0.34
SYNGAP1-204ENST00000449372 FBXO32Q969P5 355 aa12.96□□□□□ -0.34
SYNGAP1-204ENST00000449372 ZSWIM3Q96MP5 696 aa12.96□□□□□ -0.34
SYNGAP1-204ENST00000449372 LINC00052Q96N35 136 aa12.96□□□□□ -0.34
SYNGAP1-204ENST00000449372 EGFL8Q99944 293 aa12.96□□□□□ -0.34
SYNGAP1-204ENST00000449372 CWH43Q9H720 699 aa12.96□□□□□ -0.34
SYNGAP1-204ENST00000449372 TRAV19A0A0A6YYK7 116 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 F8W036 122 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 FABP7O15540 132 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 WISP3O95389 354 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 IFNA7P01567 189 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 CLCN4P51793 760 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 MAXP61244 160 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 TOR1AIP1Q5JTV8 583 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 CERS6Q6ZMG9 384 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 GLCCI1Q86VQ1 547 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 TSPYL5Q86VY4 417 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 OR6M1Q8NGM8 313 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 DNASE1L2Q92874 299 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 MYDGFQ969H8 173 aa12.95□□□□□ -0.34
SYNGAP1-204ENST00000449372 GPR21Q99679 349 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms