RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CLEC2AQ6UVW9 174 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 APTXQ7Z2E3 356 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 BPIFB2Q8N4F0 458 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 FRMD1Q8N878 549 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 HIPK4Q8NE63 616 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC37A2Q8TED4 501 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 CLDN23Q96B33 292 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 IMP4Q96G21 291 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 PPP3R2Q96LZ3 170 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 TRIB1Q96RU8 372 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 ECSITQ9BQ95 431 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SPATA5L1Q9BVQ7 753 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 Q9N2J8 555 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 VCX3AQ9NNX9 186 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 CACNA1CQ13936 2221 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 NPEPPSL1A6NEC2 478 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 NUAK1O60285 661 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 COQ9O75208 318 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 CSNK2A2P19784 350 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 PRKAA2P54646 552 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZNF267Q14586 743 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 RNASEH2BQ5TBB1 312 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 KCTD16Q68DU8 428 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 OGFOD2Q6N063 350 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 CBARPQ8N350 705 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 STX19Q8N4C7 294 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 TEX29Q8N6K0 151 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZNF419Q96HQ0 510 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SH3GL1Q99961 368 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 NAA11Q9BSU3 229 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SIX2Q9NPC8 291 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 ACTL7BQ9Y614 415 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 XKRYO14609 159 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 DNAJC8O75937 253 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 ALOX12P18054 663 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 GCH1P30793 250 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 MMP12P39900 470 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC26A3P40879 764 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 LGALS4P56470 323 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SP140Q13342 867 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 DECR1Q16698 335 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 MEP1AQ16819 746 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 WASHC2DQ5SRD0 308 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 NADSYN1Q6IA69 706 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 C12orf54Q6X4T0 127 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 RASSF6Q6ZTQ3 369 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 HDDC2Q7Z4H3 204 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 MRGPRGQ86SM5 289 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 ADIPOR2Q86V24 386 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SCCPDHQ8NBX0 429 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 OR6N1Q8NGY5 312 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC5A11Q8WWX8 675 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 MRPL48Q96GC5 212 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 PDXPQ96GD0 296 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 BARX1Q9HBU1 254 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 GID8Q9NWU2 228 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SOX13Q9UN79 622 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 KLF13Q9Y2Y9 288 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 TRIM13O60858 407 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 NIPSNAP2O75323 286 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 KRT75O95678 551 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 CD9P21926 228 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 ATP5F1P24539 256 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 RYKP34925 604 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 HSPA7P48741 367 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 ACADVLP49748 655 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 TCF15Q12870 199 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 PTP4A2Q12974 167 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 C3P1Q6ZMU1 363 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 ULK2Q8IYT8 1036 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 VWA5B2Q8N398 1253 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SPATA6LQ8N4H0 392 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 TRPC4APQ8TEL6 797 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 GATAD2BQ8WXI9 593 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 MFSD3Q96ES6 412 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 MGME1Q9BQP7 344 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 MMADHCQ9H3L0 296 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 CCNB1IP1Q9NPC3 277 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 NECTIN3Q9NQS3 549 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 NDE1Q9NXR1 346 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 ATXN10Q9UBB4 475 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 CROTQ9UKG9 612 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SNTNA6NMZ2 147 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 E7ENX8 843 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 RNASET2O00584 256 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 HMGB3O15347 200 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZFAND5O76080 213 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 MARCKSL1P49006 195 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 TAP2Q03519 686 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 OPN5Q6U736 354 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 CLNKQ7Z7G1 428 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 IFNEQ86WN2 208 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 DENND6AQ8IWF6 608 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 GPR151Q8TDV0 419 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 VPS33AQ96AX1 596 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 CUTCQ9NTM9 273 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 FAM208BQ5VWN6 2430 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 LRRC37AA6NMS7 1700 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 H3BML4 177 aa5.4□□□□□ -1.54
CDC42BPA-209ENST00000448940 BPIP17213 487 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms