RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 IGSF6O95976 241 aa15.21■□□□□ 0.03
CHRD-205ENST00000448472 TGFB1P01137 390 aa15.21■□□□□ 0.03
CHRD-205ENST00000448472 CKMP06732 381 aa15.21■□□□□ 0.03
CHRD-205ENST00000448472 RPS19P39019 145 aaKnown RBP15.21■□□□□ 0.03
CHRD-205ENST00000448472 ALDH9A1P49189 494 aa15.21■□□□□ 0.03
CHRD-205ENST00000448472 SLC11A1P49279 550 aa15.21■□□□□ 0.03
CHRD-205ENST00000448472 RAB25P57735 213 aa15.21■□□□□ 0.03
CHRD-205ENST00000448472 RNF130Q86XS8 419 aa15.21■□□□□ 0.03
CHRD-205ENST00000448472 GALNT13Q8IUC8 556 aa15.21■□□□□ 0.03
CHRD-205ENST00000448472 C2orf73Q8N5S3 287 aaPredicted RBP15.21■□□□□ 0.03
CHRD-205ENST00000448472 C1GALT1C1Q96EU7 318 aa15.21■□□□□ 0.03
CHRD-205ENST00000448472 CRELD1Q96HD1 420 aa15.21■□□□□ 0.03
CHRD-205ENST00000448472 GFM1Q96RP9 751 aaKnown RBP15.21■□□□□ 0.03
CHRD-205ENST00000448472 PITX2Q99697 317 aa15.21■□□□□ 0.03
CHRD-205ENST00000448472 MBD1Q9UIS9 605 aaPredicted RBP15.21■□□□□ 0.03
CHRD-205ENST00000448472 SSR3Q9UNL2 185 aa15.21■□□□□ 0.03
CHRD-205ENST00000448472 SLC45A1Q9Y2W3 748 aa15.21■□□□□ 0.03
CHRD-205ENST00000448472 MYO10Q9HD67 2058 aa15.21■□□□□ 0.03
CHRD-205ENST00000448472 IFI30P13284 250 aa15.21■□□□□ 0.02
CHRD-205ENST00000448472 RPS3P23396 243 aaKnown RBP eCLIP15.21■□□□□ 0.02
CHRD-205ENST00000448472 RORCP51449 518 aa15.21■□□□□ 0.02
CHRD-205ENST00000448472 SCN1BQ07699 218 aa15.21■□□□□ 0.02
CHRD-205ENST00000448472 C1DQ13901 141 aaKnown RBP15.21■□□□□ 0.02
CHRD-205ENST00000448472 TEAD4Q15561 434 aa15.21■□□□□ 0.02
CHRD-205ENST00000448472 LYPLAL1Q5VWZ2 237 aa15.21■□□□□ 0.02
CHRD-205ENST00000448472 SYCE2Q6PIF2 218 aa15.21■□□□□ 0.02
CHRD-205ENST00000448472 TMEM173Q86WV6 379 aaPredicted RBP15.21■□□□□ 0.02
CHRD-205ENST00000448472 UPF1Q92900 1129 aaKnown RBP eCLIP15.21■□□□□ 0.02
CHRD-205ENST00000448472 HECAQ9UBI9 543 aaPredicted RBP15.21■□□□□ 0.02
CHRD-205ENST00000448472 Q9Y3F1 56 aa15.21■□□□□ 0.02
CHRD-205ENST00000448472 GREB1Q4ZG55 1949 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 TRBC2A0A5B9 178 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 FADS2P1A8MWK0 482 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 HOXC11O43248 304 aaPredicted RBP15.2■□□□□ 0.02
CHRD-205ENST00000448472 ARHGEF9O43307 516 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 GPX5O75715 221 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 ITGA2P17301 1181 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 ZNF157P51786 506 aaPredicted RBP15.2■□□□□ 0.02
CHRD-205ENST00000448472 RPS26P62854 115 aaKnown RBP15.2■□□□□ 0.02
CHRD-205ENST00000448472 MEF2AQ02078 507 aaPredicted RBP15.2■□□□□ 0.02
CHRD-205ENST00000448472 C2orf80Q0P641 193 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 MICAQ29983 383 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 GPR33Q49SQ1 333 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 PPP2R2DQ66LE6 453 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 MACC1Q6ZN28 852 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 THOC6Q86W42 341 aaKnown RBP15.2■□□□□ 0.02
CHRD-205ENST00000448472 OR6F1Q8NGZ6 308 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 ASIC5Q9NY37 505 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 CCDC59Q9P031 241 aaKnown RBP15.2■□□□□ 0.02
CHRD-205ENST00000448472 GAPDHSO14556 408 aaPredicted RBP15.2■□□□□ 0.02
CHRD-205ENST00000448472 MRPS14O60783 128 aaKnown RBP15.2■□□□□ 0.02
CHRD-205ENST00000448472 PRAMEF4O60810 478 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 PREPP48147 710 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 RPS13P62277 151 aaKnown RBP15.2■□□□□ 0.02
CHRD-205ENST00000448472 CDK6Q00534 326 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 DSC1Q08554 894 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 VEZF1Q14119 521 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 BAK1Q16611 211 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 PRAMEF9Q5VWM5 478 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 TNFAIP8L2Q6P589 184 aaPredicted RBP15.2■□□□□ 0.02
CHRD-205ENST00000448472 CADM2Q8N3J6 435 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 CELF5Q8N6W0 485 aaKnown RBP15.2■□□□□ 0.02
CHRD-205ENST00000448472 CIDECQ96AQ7 238 aaPredicted RBP15.2■□□□□ 0.02
CHRD-205ENST00000448472 OTULINQ96BN8 352 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 SMAD5Q99717 465 aaKnown RBP15.2■□□□□ 0.02
CHRD-205ENST00000448472 TVP23BQ9NYZ1 205 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 COMMD3Q9UBI1 195 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 HCN4Q9Y3Q4 1203 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 ENTPD6O75354 484 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 IGFBP1P08833 259 aaPredicted RBP15.2■□□□□ 0.02
CHRD-205ENST00000448472 JUPP14923 745 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 IL12RB1P42701 662 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 WNT3P56703 355 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 ANXA8L1Q5VT79 327 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 ZNF367Q7RTV3 350 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 HMGN2P46Q86SG4 172 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 CHCHD4Q8N4Q1 142 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 DENND6BQ8NEG7 585 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 CLP1Q92989 425 aaKnown RBP15.2■□□□□ 0.02
CHRD-205ENST00000448472 DACT3Q96B18 629 aaPredicted RBP15.2■□□□□ 0.02
CHRD-205ENST00000448472 COQ8BQ96D53 544 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 MIEF1Q9NQG6 463 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 GABRQQ9UN88 632 aa15.2■□□□□ 0.02
CHRD-205ENST00000448472 ANKDD1BA6NHY2 528 aa15.19■□□□□ 0.02
CHRD-205ENST00000448472 H7C4K7 107 aa15.19■□□□□ 0.02
CHRD-205ENST00000448472 C8GP07360 202 aa15.19■□□□□ 0.02
CHRD-205ENST00000448472 ARPC4P59998 168 aa15.19■□□□□ 0.02
CHRD-205ENST00000448472 SNRPD2P62316 118 aaKnown RBP15.19■□□□□ 0.02
CHRD-205ENST00000448472 HNRNPA0Q13151 305 aaKnown RBP15.19■□□□□ 0.02
CHRD-205ENST00000448472 VEPH1Q14D04 833 aa15.19■□□□□ 0.02
CHRD-205ENST00000448472 SPDYE7PQ495Y7 208 aa15.19■□□□□ 0.02
CHRD-205ENST00000448472 USP30Q70CQ3 517 aa15.19■□□□□ 0.02
CHRD-205ENST00000448472 USP45Q70EL2 814 aa15.19■□□□□ 0.02
CHRD-205ENST00000448472 PLPP6Q8IY26 295 aa15.19■□□□□ 0.02
CHRD-205ENST00000448472 TCEANCQ8N8B7 351 aa15.19■□□□□ 0.02
CHRD-205ENST00000448472 TMEM159Q96B96 161 aa15.19■□□□□ 0.02
CHRD-205ENST00000448472 PPCDCQ96CD2 204 aa15.19■□□□□ 0.02
CHRD-205ENST00000448472 OR51B5Q9H339 312 aa15.19■□□□□ 0.02
CHRD-205ENST00000448472 RDH14Q9HBH5 336 aa15.19■□□□□ 0.02
CHRD-205ENST00000448472 SCAMP2O15127 329 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms