RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 MKKSQ9NPJ1 570 aaPredicted RBP12.65□□□□□ -0.38
SNHG4-201ENST00000448190 MKL2Q9ULH7 1088 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 MAP4K5Q9Y4K4 846 aa12.65□□□□□ -0.38
SNHG4-201ENST00000448190 SNRNP200O75643 2136 aaKnown RBP12.64□□□□□ -0.39
SNHG4-201ENST00000448190 URADA6NGE7 173 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 H0YIG0 161 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 RTCAO00442 366 aaKnown RBP12.64□□□□□ -0.39
SNHG4-201ENST00000448190 PRPF4O43172 522 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNHG4-201ENST00000448190 B4GALT2O60909 372 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 BMP10O95393 424 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 RECKO95980 971 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 ITGB2P05107 769 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 RPS17P08708 135 aaKnown RBP12.64□□□□□ -0.39
SNHG4-201ENST00000448190 CPA3P15088 417 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 IMPDH1P20839 514 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 EFNA3P52797 238 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 STXBP1P61764 594 aaKnown RBP12.64□□□□□ -0.39
SNHG4-201ENST00000448190 RPS13P62277 151 aaKnown RBP12.64□□□□□ -0.39
SNHG4-201ENST00000448190 HERVK_113P63132 956 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 CLCQ05315 142 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 PCDH1Q08174 1060 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 RAPSNQ13702 412 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 RUNX2Q13950 521 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 MINDY4Q4G0A6 757 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 CRTC2Q53ET0 693 aaPredicted RBP12.64□□□□□ -0.39
SNHG4-201ENST00000448190 ZYG11AQ6WRX3 759 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 UBE3DQ7Z6J8 389 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 MRGPREQ86SM8 312 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 RAB43Q86YS6 212 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 ZC3H7AQ8IWR0 971 aaKnown RBP12.64□□□□□ -0.39
SNHG4-201ENST00000448190 LAS2Q8IYD9 372 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 RIBC1Q8N443 379 aaPredicted RBP12.64□□□□□ -0.39
SNHG4-201ENST00000448190 BANPQ8N9N5 519 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 L3MBTL4Q8NA19 623 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 ARMC2Q8NEN0 867 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 OR4F6Q8NGB9 312 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 HUS1BQ8NHY5 278 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 THAP4Q8WY91 577 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 UBE2E3Q969T4 207 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 FAR2Q96K12 515 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 SORBS1Q9BX66 1292 aaKnown RBP12.64□□□□□ -0.39
SNHG4-201ENST00000448190 ERVK-6Q9BXR3 956 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 FAM117AQ9C073 453 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 PITHD1Q9GZP4 211 aaPredicted RBP12.64□□□□□ -0.39
SNHG4-201ENST00000448190 ING2Q9H160 280 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 P4HTMQ9NXG6 502 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 SLC17A7Q9P2U7 560 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 COPG2Q9UBF2 871 aa12.64□□□□□ -0.39
SNHG4-201ENST00000448190 IGLV3-12A0A075B6K2 115 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 MAGEB17A8MXT2 336 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 IDSB3KWA1 339 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 ERVH48-1M5A8F1 160 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 PEX12O00623 359 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 SOCS6O14544 535 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 RGS16O15492 202 aaPredicted RBP12.63□□□□□ -0.39
SNHG4-201ENST00000448190 ERLIN1O75477 346 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 OR4F21O95013 312 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 PRB1P04280 392 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 MMP11P24347 488 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 NAGLUP54802 743 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 POLE2P56282 527 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 TRAF3Q13114 568 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 E2F2Q14209 437 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 CCDC153Q494R4 210 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 SOWAHCQ53LP3 525 aaPredicted RBP12.63□□□□□ -0.39
SNHG4-201ENST00000448190 BEND6Q5SZJ8 279 aaPredicted RBP12.63□□□□□ -0.39
SNHG4-201ENST00000448190 TTC19Q6DKK2 380 aaPredicted RBP12.63□□□□□ -0.39
SNHG4-201ENST00000448190 LETMD1Q6P1Q0 360 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 METTL2BQ6P1Q9 378 aaKnown RBP12.63□□□□□ -0.39
SNHG4-201ENST00000448190 KIRREL2Q6UWL6 708 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 C10orf107Q8IVU9 208 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 FAM111AQ96PZ2 611 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 UBL7Q96S82 380 aaPredicted RBP12.63□□□□□ -0.39
SNHG4-201ENST00000448190 NTMT1Q9BV86 223 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 MS4A8Q9BY19 250 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 SHCBP1LQ9BZQ2 653 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 SEMA4CQ9C0C4 833 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 PRDM7Q9NQW5 492 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 FARSBQ9NSD9 589 aaKnown RBP12.63□□□□□ -0.39
SNHG4-201ENST00000448190 ZNF225Q9UK10 706 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 NXT1Q9UKK6 140 aaKnown RBP12.63□□□□□ -0.39
SNHG4-201ENST00000448190 PLLPQ9Y342 182 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 PCDHGA11Q9Y5H2 935 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 HS3ST3B1Q9Y662 390 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 IGSF10Q6WRI0 2623 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 BOD1L1Q8NFC6 3051 aa12.63□□□□□ -0.39
SNHG4-201ENST00000448190 PIEZO2Q9H5I5 2752 aa12.62□□□□□ -0.39
SNHG4-201ENST00000448190 IGHV3-20A0A0C4DH32 117 aa12.62□□□□□ -0.39
SNHG4-201ENST00000448190 H0YIV9 168 aa12.62□□□□□ -0.39
SNHG4-201ENST00000448190 K7EM74 188 aa12.62□□□□□ -0.39
SNHG4-201ENST00000448190 BTG2P78543 158 aa12.62□□□□□ -0.39
SNHG4-201ENST00000448190 EEF1A2Q05639 463 aaKnown RBP12.62□□□□□ -0.39
SNHG4-201ENST00000448190 TCHHL1Q5QJ38 904 aaPredicted RBP12.62□□□□□ -0.39
SNHG4-201ENST00000448190 DEPDC1Q5TB30 811 aa12.62□□□□□ -0.39
SNHG4-201ENST00000448190 ABHD17CQ6PCB6 329 aa12.62□□□□□ -0.39
SNHG4-201ENST00000448190 CHSY3Q70JA7 882 aa12.62□□□□□ -0.39
SNHG4-201ENST00000448190 SLC22A9Q8IVM8 553 aa12.62□□□□□ -0.39
SNHG4-201ENST00000448190 PARP9Q8IXQ6 854 aa12.62□□□□□ -0.39
SNHG4-201ENST00000448190 CA13Q8N1Q1 262 aa12.62□□□□□ -0.39
SNHG4-201ENST00000448190 CDYL2Q8N8U2 506 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms