RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 A0A1B0GVC2 190 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 ZNF726A6NNF4 738 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 DISC1C4P0D8 188 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 ARVCFO00192 962 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 RP2O75695 350 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 RPS13P62277 151 aaKnown RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 CD47Q08722 323 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 USF2Q15853 346 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 LRRC66Q68CR7 880 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 ANKRD26P1Q6NSI1 321 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 CCBE1Q6UXH8 406 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 LRRTM4Q86VH4 590 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 RNF130Q86XS8 419 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 ZC3H3Q8IXZ2 948 aaKnown RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 SLC44A3Q8N4M1 653 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 SAMD12Q8N8I0 201 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 KREMEN2Q8NCW0 462 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 IL12RB2Q99665 862 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 MINDY3Q9H8M7 445 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 TAS2R9Q9NYW1 312 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 ERVK-18Q9QC07 812 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 ABCD2Q9UBJ2 740 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 DLGAP4Q9Y2H0 992 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 IFT52Q9Y366 437 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 KIF13AQ9H1H9 1805 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 A0A096LPI6 279 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 TEX13DA0A0J9YY54 714 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 KLHL33A6NCF5 533 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 BOLA2-SMG1P6H3BVE0 249 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 NDUFS4O43181 175 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 NUAK1O60285 661 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 POP7O75817 140 aaKnown RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 OR2B3O76000 313 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 OR7A10O76100 309 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 CSTBP04080 98 aaKnown RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 HSD11B1P28845 292 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 RFC2P35250 354 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 HOXD13P35453 343 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 MAP2K4P45985 399 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 BDKRB1P46663 353 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 BLKP51451 505 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 CLCNKAP51800 687 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 RPP38P78345 283 aaKnown RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 GRIK2Q13002 908 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 CHAF1BQ13112 559 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 LASP1Q14847 261 aaKnown RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 ARSIQ5FYB1 569 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 TECRLQ5HYJ1 363 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 ANKFN1Q8N957 763 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 PSD4Q8NDX1 1056 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 NEIL3Q8TAT5 605 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 SH3RF2Q8TEC5 729 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 TFGQ92734 400 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 MGLLQ99685 303 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 RANBP3Q9H6Z4 567 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 CCSER2Q9H7U1 834 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 SMURF1Q9HCE7 757 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 Q9N2J8 555 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 POLE4Q9NR33 117 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 RHCGQ9UBD6 479 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 SRRDQ9UH36 339 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 CLCA3PQ9Y6N3 262 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 LOC100509620A0A075B734 347 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 CLCA1A8K7I4 914 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 FKTNO75072 461 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 IL7P13232 177 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 VIPR1P32241 457 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 GRIA2P42262 883 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 MAGEA8P43361 318 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 STT3AP46977 705 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 NRG3P56975 720 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 CMPK2Q5EBM0 449 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 GARNL3Q5VVW2 1013 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 HMBOX1Q6NT76 420 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 HAGHLQ6PII5 290 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 AMIGO1Q86WK6 493 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 ZSWIM9Q86XI8 627 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 CMTR2Q8IYT2 770 aaKnown RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 MINDY1Q8N5J2 469 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 MTMR14Q8NCE2 650 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 DBF4BQ8NFT6 615 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 RHEBL1Q8TAI7 183 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 DENND1AQ8TEH3 1009 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 THEM6Q8WUY1 208 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 SLC5A11Q8WWX8 675 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 DHRS1Q96LJ7 313 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 NLE1Q9NVX2 485 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 UBQLN2Q9UHD9 624 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 CNOT11Q9UKZ1 510 aaKnown RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 SCML2Q9UQR0 700 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 WDR45Q9Y484 360 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 SH3D21A4FU49 640 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 E7EQ34 232 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 NRP1O14786 923 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 PLD2O14939 933 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 VNN2O95498 520 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 SCGB1D2O95969 90 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 HOXD8P13378 290 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-204ENST00000448183 DNASE1P24855 282 aa7.52□□□□□ -1.21
NEDD9-204ENST00000448183 KDELR2P33947 212 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms