RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 POM121BA6NF01 834 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 H0Y8X5 98 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 CLOCKO15516 846 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 C1orf105O95561 183 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 PGRP06401 933 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 IMPDH2P12268 514 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 TPP2P29144 1249 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 DSTNP60981 165 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 UFM1P61960 85 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 SPANXN4Q5MJ08 99 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 CTSL3PQ5NE16 218 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 HENMT1Q5T8I9 393 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 KIAA1211LQ6NV74 962 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 FBXW8Q8N3Y1 598 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 DHRSXQ8N5I4 330 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 OR8K5Q8NH50 307 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 PDXPQ96GD0 296 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 ZSCAN32Q9NX65 697 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 P2RX2Q9UBL9 471 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 PRODH2Q9UF12 536 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 PISDQ9UG56 409 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 PCTPQ9UKL6 214 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 C1orf226A1L170 272 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 CCNA2P20248 432 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 CLCN7P51798 805 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 GPR68Q15743 365 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 ZNF730Q6ZMV8 503 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 SMPDL3BQ92485 455 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 LYSMD1Q96S90 227 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 FAM129BQ96TA1 746 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 EPHX3Q9H6B9 360 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 EPS8L2Q9H6S3 715 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 KLRF1Q9NZS2 232 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 CNOT3O75175 753 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 ZBTB11O95625 1053 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 GSTT1P30711 240 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 ADARP55265 1226 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 DLG1Q12959 904 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 MRPL28Q13084 256 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 OR52E8Q6IFG1 317 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 GALNT18Q6P9A2 607 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 FAM13CQ8NE31 585 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 FAM81AQ8TBF8 368 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 ASB11Q8WXH4 323 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 KLHL6Q8WZ60 621 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 KNTC1P50748 2209 aa13.54□□□□□ -0.24
SMARCA4-204ENST00000444061 IL3P08700 152 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 SIGLEC14Q08ET2 396 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 EPGNQ6UW88 154 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 RTL4Q6ZR62 310 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 CCDC116Q8IYX3 515 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 FITM2Q8N6M3 262 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 ZNF480Q8WV37 535 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 PEX11GQ96HA9 241 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 NSMCE3Q96MG7 304 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 CXorf51AA0A1B0GTR3 108 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 KPNA4O00629 521 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 SAGP10523 405 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 TTKP33981 857 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 PPP2CBP62714 309 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 PPP2CAP67775 309 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 EPS8Q12929 822 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 OR4C11Q6IEV9 310 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 GRHL2Q6ISB3 625 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 MCATQ8IVS2 390 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 SLC30A8Q8IWU4 369 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 SLC22A15Q8IZD6 547 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 OR4K1Q8NGD4 311 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 SLC38A2Q96QD8 506 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 RPF2Q9H7B2 306 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 EPOPA6NHQ4 379 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 PLRG1O43660 514 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 PVRP15151 417 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 ENGP17813 658 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 PSMA3P25788 255 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 OTX2P32243 289 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 FGL2Q14314 439 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 LASP1Q14847 261 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 TAF13Q15543 124 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 KHDRBS2Q5VWX1 349 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 ZFAND4Q86XD8 727 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 FAM47BQ8NA70 645 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 OR4K17Q8NGC6 315 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 MAGEE2Q8TD90 523 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 LPAR4Q99677 370 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 TMEM79Q9BSE2 394 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 IER2Q9BTL4 223 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 C1QTNF2Q9BXJ5 285 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 METTL7AQ9H8H3 244 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 SDHAF3Q9NRP4 125 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 MAU2Q9Y6X3 613 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 PLXNA1Q9UIW2 1896 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 PARP14Q460N5 1801 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 TMEM221A6NGB7 291 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 M0R296 226 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 MMP2P08253 660 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 ITGA1P56199 1179 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 CDC42P60953 191 aa13.53□□□□□ -0.24
SMARCA4-204ENST00000444061 SPPL2CQ8IUH8 684 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms