RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 A0A1W2PQ09 198 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 ZNF320A2RRD8 509 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 MARCH11A6NNE9 402 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 AP4M1O00189 453 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 CHST10O43529 356 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 SOX15O60248 233 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 IL1AP01583 271 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 ATXN1LP0C7T5 689 aaKnown RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 HOXB6P17509 224 aaKnown RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 CPT2P23786 658 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 YWHAQP27348 245 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 GJA5P36382 358 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 ETV6P41212 452 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 ASPAP45381 313 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 MAP2K4P45985 399 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 TTPAP49638 278 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 HCCSP53701 268 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 RANP62826 216 aaKnown RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 EN1Q05925 392 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 AAK1Q2M2I8 961 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 FAM171BQ6P995 826 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 NXPE4Q6UWF7 544 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 WDR53Q7Z5U6 358 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 RNF180Q86T96 592 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 PARGQ86W56 976 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 CATSPERDQ86XM0 798 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 VRK3Q8IV63 474 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 NKAIN4Q8IVV8 208 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 NPAS3Q8IXF0 933 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 VGLL2Q8N8G2 317 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 FAM83FQ8NEG4 500 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 OR13F1Q8NGS4 319 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 POP5Q969H6 163 aaKnown RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 ACSF2Q96CM8 615 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 OTUB2Q96DC9 234 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 PCYT2Q99447 389 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 AGPAT1Q99943 283 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 MAPKAP1Q9BPZ7 522 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 ABCG5Q9H222 651 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 ARV1Q9H2C2 271 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 QTRT2Q9H974 415 aaKnown RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 CHODLQ9H9P2 273 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 BEX1Q9HBH7 125 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 HEBP1Q9NRV9 189 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 PLCXD1Q9NUJ7 323 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 SLC23A1Q9UHI7 598 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 TBX20Q9UMR3 447 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 HSPE1-MOB4S4R3N1 261 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 A0A1W2PRB8 838 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 H3BN98 237 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 OR2T1O43869 369 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 NPHS1O60500 1241 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 RECKO95980 971 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 UBBP0CG47 229 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 SPP1P10451 314 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 SELLP14151 372 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 CD58P19256 250 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 CD247P20963 164 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 PRPS1L1P21108 318 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 TUBG1P23258 451 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 HLA-DMAP28067 261 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 PBX1P40424 430 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 PIGHQ14442 188 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 P2RY14Q15391 338 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 MEP1AQ16819 746 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 KCTD19Q17RG1 926 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 LRRC38Q5VT99 294 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 CXXC5Q7LFL8 322 aaKnown RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 GALNT5Q7Z7M9 940 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 CBARPQ8N350 705 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 FIBINQ8TAL6 211 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 RASGRP4Q8TDF6 673 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 ZNF514Q96K75 400 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 OR51J1Q9H342 316 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 ZCCHC4Q9H5U6 513 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 SLC28A3Q9HAS3 691 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 LGR6Q9HBX8 967 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 TMEM184CQ9NVA4 438 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 PTGFRNQ9P2B2 879 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 ZNF629Q9UEG4 869 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 PURGQ9UJV8 347 aaKnown RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 TINAGQ9UJW2 476 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 SLC13A4Q9UKG4 626 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 CAMK2AQ9UQM7 478 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 MN1Q10571 1320 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 PI4KAP2A4QPH2 592 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 SERPINE3A8MV23 424 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 ADAMDEC1O15204 470 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 PQBP1O60828 265 aaKnown RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 ITGA10O75578 1167 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 CST2P09228 141 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 GTF2F2P13984 249 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 GLRA2P23416 452 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 TLX1P31314 330 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 AKR1C2P52895 323 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 CDH12P55289 794 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 HMGN3Q15651 99 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 ZNF468Q5VIY5 522 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-209ENST00000442510 GRHL2Q6ISB3 625 aa5.42□□□□□ -1.54
PTPRC-209ENST00000442510 WDR73Q6P4I2 378 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms