RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 IL10RBQ08334 325 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 ASPHQ12797 758 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 SMARCB1Q12824 385 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 ITGA9Q13797 1035 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 HNRNPDQ14103 355 aaKnown RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 PTGR1Q14914 329 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 DNAL1Q4LDG9 190 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZNF766Q5HY98 468 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 CFAP157Q5JU67 520 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 CLLU1OSQ5K130 101 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 C6orf10Q5SRN2 563 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 C6orf163Q5TEZ5 329 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 MARC1Q5VT66 337 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM171A1Q5VUB5 890 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 SDHAF4Q5VUM1 108 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 CES4AQ5XG92 561 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 KIAA0930Q6ICG6 404 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 ACSM6Q6P461 480 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZCCHC23Q6ZST2 131 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 RAPH1Q70E73 1250 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 MEPCEQ7L2J0 689 aaKnown RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 KRT74Q7RTS7 529 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 SZRD1Q7Z422 152 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 CMC1Q7Z7K0 106 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 LCA5Q86VQ0 697 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZC3HC1Q86WB0 502 aaKnown RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 C10orf107Q8IVU9 208 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 LAS2Q8IYD9 372 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 UMODL1-AS1Q8N2C9 162 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 TMEM199Q8N511 208 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 TEX9Q8N6V9 391 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 ENDOVQ8N8Q3 282 aaKnown RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 RTL3Q8N8U3 475 aaKnown RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 IPMKQ8NFU5 416 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 SPATA22Q8NHS9 363 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 GABPB2Q8TAK5 448 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZCCHC10Q8TBK6 192 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 FBXO32Q969P5 355 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 AZIN2Q96A70 460 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 MCUR1Q96AQ8 359 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARRDC3Q96B67 414 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 SH3KBP1Q96B97 665 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 RNFT2Q96EX2 444 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 PERPQ96FX8 193 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 ATXN7L3BQ96GX2 97 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 PRR11Q96HE9 360 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 VPS39Q96JC1 886 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 ANKRD27Q96NW4 1050 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 NUDCD1Q96RS6 583 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 RANBP9Q96S59 729 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 GPR22Q99680 433 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 LBHD1Q9BQE6 289 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 CLSTN3Q9BQT9 956 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 EBF4Q9BQW3 602 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 FICDQ9BVA6 458 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 CADM1Q9BY67 442 aaKnown RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 SEZ6LQ9BYH1 1024 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 C20orf27Q9GZN8 174 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 NMUR2Q9GZQ4 415 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 SLC25A51Q9H1U9 297 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 RHOJQ9H4E5 214 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 DENND2DQ9H6A0 471 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 DCLRE1BQ9H816 532 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 NMRAL1Q9HBL8 299 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 THSD1Q9NS62 852 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 HIF1ANQ9NWT6 349 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 OSER1Q9NX31 292 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 TMEM161AQ9NX61 479 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 PPP1R14DQ9NXH3 145 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 TAS2R1Q9NYW7 299 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 IL37Q9NZH6 218 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 IL1RAPL1Q9NZN1 696 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 MSRB1Q9NZV6 116 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 MPP6Q9NZW5 540 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 MARCOQ9UEW3 520 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 SARDHQ9UL12 918 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 NEU3Q9UQ49 428 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 RUVBL2Q9Y230 463 aaKnown RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 PRG3Q9Y2Y8 225 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 ACOT9Q9Y305 439 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 L3MBTL1Q9Y468 752 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 SCN1AP35498 2009 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 IGLV3-10A0A075B6K4 115 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 A0A1W2PQM1 296 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM92AA1XBS5 289 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 HEATR9A2RTY3 570 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 MTMR11A4FU01 709 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 GAGE12JA6NER3 117 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 PRR23D1E9PI22 279 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 GOLGA8TH3BQL2 631 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 PRYO14603 147 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 AP3D1O14617 1153 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZNF195O14628 629 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 TSPAN4O14817 238 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 PEX11AO75192 247 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 TM7SF2O76062 418 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 VAPBO95292 243 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 PAPSS2O95340 614 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms