RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TSPAN4O14817 238 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 ADAMDEC1O15204 470 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 CSO75390 466 aaKnown RBP12.87□□□□□ -0.35
ACTN1-204ENST00000438964 CCNB2O95067 398 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 HBQ1P09105 142 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 MAPK12P53778 367 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 LRRC74AQ0VAA2 488 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 LAMTOR1Q6IAA8 161 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 NOXRED1Q6NXP6 359 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 FBXO32Q969P5 355 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 ATP13A2Q9NQ11 1180 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 FCF1Q9Y324 198 aaKnown RBP12.87□□□□□ -0.35
ACTN1-204ENST00000438964 MYO16Q9Y6X6 1858 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 H3BN98 237 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 SAP18O00422 153 aaKnown RBP12.86□□□□□ -0.35
ACTN1-204ENST00000438964 MTX2O75431 263 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 GASTP01350 101 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 RAB8AP61006 207 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 GPR19Q15760 415 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 DUOXA1Q1HG43 343 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 RNASE12Q5GAN4 147 aaKnown RBP12.86□□□□□ -0.35
ACTN1-204ENST00000438964 GHDCQ8N2G8 530 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 SEPT5Q99719 369 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-204ENST00000438964 TTLL2Q9BWV7 592 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 TRIM45Q9H8W5 580 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-204ENST00000438964 NMRK2Q9NPI5 230 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 C12orf4Q9NQ89 552 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 ASAH2Q9NR71 780 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 MAP4K5Q9Y4K4 846 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 TEX46H3BTG2 121 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 K7ERQ8 282 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 KRT6AP02538 564 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 KRT6BP04259 564 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 SEMG1P04279 462 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 GABRB1P18505 474 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 SSTR2P30874 369 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 LARS2Q15031 903 aaKnown RBP12.86□□□□□ -0.35
ACTN1-204ENST00000438964 OR2G6Q5TZ20 316 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 ZFAND1Q8TCF1 268 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 UPRTQ96BW1 309 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 WACQ9BTA9 647 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 GABARAPL3Q9BY60 117 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 PPIL3Q9H2H8 161 aaKnown RBP12.86□□□□□ -0.35
ACTN1-204ENST00000438964 CTPS2Q9NRF8 586 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 A3GALT2U3KPV4 340 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 PLXNB2O15031 1838 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 C2orf78A6NCI8 922 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 GTPBP1O00178 669 aaKnown RBP12.86□□□□□ -0.35
ACTN1-204ENST00000438964 RPIAP49247 311 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 LIMK1P53667 647 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 WNT3P56703 355 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 FCHO2Q0JRZ9 810 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 COL9A2Q14055 689 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-204ENST00000438964 CD300LGQ6UXG3 332 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 ASB18Q6ZVZ8 466 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 TRIM46Q7Z4K8 759 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 PDZD3Q86UT5 571 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 GRAMD2AQ8IUY3 354 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 OR52E4Q8NGH9 312 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 NFKBIDQ8NI38 313 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 NPLOC4Q8TAT6 608 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 LRRC20Q8TCA0 184 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 ZNF556Q9HAH1 456 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 POLHQ9Y253 713 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 KLK4Q9Y5K2 254 aa12.86□□□□□ -0.35
ACTN1-204ENST00000438964 NUMA1Q14980 2115 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 FAM240BA0A1B0GVZ2 78 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 BTN3A3O00478 584 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 POLR1CO15160 346 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-204ENST00000438964 HOXB9P17482 250 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-204ENST00000438964 TACR2P21452 398 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 CHMP24386 653 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 PSMA1P25786 263 aaKnown RBP12.85□□□□□ -0.35
ACTN1-204ENST00000438964 PTGER3P43115 390 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 CRYBB2P43320 205 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 GZMKP49863 264 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 IER5LQ5T953 404 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 RFLNAQ6ZTI6 216 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 CCDC149Q6ZUS6 474 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 SERPINA11Q86U17 422 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 REPS1Q96D71 796 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 C1GALT1C1Q96EU7 318 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 ZBED6CLQ96FA7 236 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-204ENST00000438964 C1orf74Q96LT6 269 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 PKMYT1Q99640 499 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 PDFQ9HBH1 243 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 GKN1Q9NS71 199 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 KCNN3Q9UGI6 736 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 SATB2Q9UPW6 733 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 SNX11Q9Y5W9 270 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 GSAPA4D1B5 854 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 WASHC1A8K0Z3 465 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 WASH4PA8MWX3 477 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 H3BUI4 141 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 NUPL2O15504 423 aaKnown RBP12.85□□□□□ -0.35
ACTN1-204ENST00000438964 DDNO94850 711 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-204ENST00000438964 TRBC1P01850 177 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 CD52P31358 61 aa12.85□□□□□ -0.35
ACTN1-204ENST00000438964 CRYBB1P53674 252 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-204ENST00000438964 RPS26P62854 115 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms