RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 CD72P21854 359 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 MMP12P39900 470 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 TOP3AQ13472 1001 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 ZNF542PQ5EBM4 170 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 CEP78Q5JTW2 689 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 CATSPEREQ5SY80 951 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 C10orf62Q5T681 223 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 NXPE4Q6UWF7 544 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 HACD2Q6Y1H2 254 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 ADIPOR2Q86V24 386 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 MCFD2Q8NI22 146 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 CHFRQ96EP1 664 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 POLE4Q9NR33 117 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 SPATA7Q9P0W8 599 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 NCDNQ9UBB6 729 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 ANK1P16157 1881 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 GLOD5A6NK44 160 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 M0QX08 132 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 POLR2CP19387 275 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 PBX2P40425 430 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 UGT2B15P54855 530 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 OR4D2P58180 307 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 C1DQ13901 141 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 PTCRAQ6ISU1 281 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 THAP5Q7Z6K1 395 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 ADGRD2Q7Z7M1 963 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 CYP4Z2PQ8N1L4 340 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 UXS1Q8NBZ7 420 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 HMGCLL1Q8TB92 370 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 TSACCQ96A04 125 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 KLHDC7BQ96G42 594 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 TEFMQ96QE5 360 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 F2RL3Q96RI0 385 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 FAM83CQ9BQN1 747 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 COPS4Q9BT78 406 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 NTMT1Q9BV86 223 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 GPR174Q9BXC1 333 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 ADAP2Q9NPF8 381 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 GMEB1Q9Y692 573 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 ZNF638Q14966 1978 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 MAN2B1O00754 1011 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 HOXC11O43248 304 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 B3GALT2O43825 422 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 DIRAS1O95057 198 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 TTKP33981 857 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 MPIP34949 423 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 BTN3A2P78410 334 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 C1orf61Q13536 156 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 SCARB2Q14108 478 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 NDUFA9Q16795 377 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 AHSA2Q719I0 299 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 GPR149Q86SP6 731 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 PSD4Q8NDX1 1056 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 OR8J3Q8NGG0 315 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 FNDC8Q8TC99 324 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 SETD7Q8WTS6 366 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 TMBIM1Q969X1 311 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 TAMM41Q96BW9 452 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 C12orf43Q96C57 262 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 MRPL38Q96DV4 380 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 DPH7Q9BTV6 452 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 ZNF385DQ9H6B1 395 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 ABCB9Q9NP78 766 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 TOR4AQ9NXH8 423 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 MRPS7Q9Y2R9 242 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 PRRT4C9JH25 899 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 H3BNH8 94 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 BCKDKO14874 412 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 POU2F1P14859 743 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 P2RY2P41231 377 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 PRLHRP49683 370 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 CDK9P50750 372 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 HTRA4P83105 476 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 MERTKQ12866 999 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 INAQ16352 499 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 MINDY4Q4G0A6 757 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 PRRT3Q5FWE3 981 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 TOR1AIP1Q5JTV8 583 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 IER5LQ5T953 404 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 KIAA1161Q6NSJ0 714 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 METTL2BQ6P1Q9 378 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 UNC5DQ6UXZ4 953 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 CARM1Q86X55 608 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 ERI1Q8IV48 349 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 RBM12BQ8IXT5 1001 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 VN1R2Q8NFZ6 395 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 NEIL2Q969S2 332 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 RBM18Q96H35 190 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 C8orf33Q9H7E9 229 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 PRSS16Q9NQE7 514 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 HEBP1Q9NRV9 189 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 UTS2RQ9UKP6 389 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 GPR45Q9Y5Y3 372 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 ARID1AO14497 2285 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 KRT87PA6NCN2 255 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 FBP2O00757 339 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 CAPN5O15484 640 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 UGT2B17O75795 530 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 IL7RP16871 459 aa11.12□□□□□ -0.63
TRAPPC9-202ENST00000438773 SHMT2P34897 504 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms