RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 SDHAF4Q5VUM1 108 aa10.66□□□□□ -0.7
SEMA4D-209ENST00000429836 KIAA1324Q6UXG2 1013 aaKnown RBP10.66□□□□□ -0.7
SEMA4D-209ENST00000429836 WDR53Q7Z5U6 358 aaPredicted RBP10.66□□□□□ -0.7
SEMA4D-209ENST00000429836 DENND1CQ8IV53 801 aa10.66□□□□□ -0.7
SEMA4D-209ENST00000429836 PGBD3Q8N328 593 aa10.66□□□□□ -0.7
SEMA4D-209ENST00000429836 OR6C4Q8NGE1 309 aa10.66□□□□□ -0.7
SEMA4D-209ENST00000429836 LHFPL5Q8TAF8 219 aa10.66□□□□□ -0.7
SEMA4D-209ENST00000429836 POP5Q969H6 163 aaKnown RBP10.66□□□□□ -0.7
SEMA4D-209ENST00000429836 APIPQ96GX9 242 aa10.66□□□□□ -0.7
SEMA4D-209ENST00000429836 TM9SF2Q99805 663 aa10.66□□□□□ -0.7
SEMA4D-209ENST00000429836 ABCC13Q9NSE7 274 aa10.66□□□□□ -0.7
SEMA4D-209ENST00000429836 SEC14L4Q9UDX3 406 aa10.66□□□□□ -0.7
SEMA4D-209ENST00000429836 MGAT4AQ9UM21 535 aa10.66□□□□□ -0.7
SEMA4D-209ENST00000429836 LSM2Q9Y333 95 aaKnown RBP10.66□□□□□ -0.7
SEMA4D-209ENST00000429836 PAPPA2Q9BXP8 1791 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 HYKKA2RU49 373 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 CASTOR2A6NHX0 329 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 MAGEB17A8MXT2 336 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 FAM227AF5H4B4 570 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 SLC9A3R1O14745 358 aaPredicted RBP10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 YY2O15391 372 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 LYRM1O43325 122 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 PSIP1O75475 530 aaKnown RBP10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 PRLP01236 227 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 HMBSP08397 361 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 HLA-EP13747 358 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 RHOQP17081 205 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 HTR7P34969 479 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 TALDO1P37837 337 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 PXNP49023 591 aaPredicted RBP10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 ABATP80404 500 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 LRRC32Q14392 662 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 FCN2Q15485 313 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 SF1Q15637 639 aaKnown RBP10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 AANATQ16613 207 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 DUOXA1Q1HG43 343 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 MS4A13Q5J8X5 152 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 DDI2Q5TDH0 399 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 LRRTM3Q86VH5 581 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 PHC2Q8IXK0 858 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 TMEM145Q8NBT3 493 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 ZBTB44Q8NCP5 570 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 DNAJB8Q8NHS0 232 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 ZNF431Q8TF32 576 aaPredicted RBP10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 KCNJ9Q92806 393 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 MYEOVQ96EZ4 313 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 METTL2AQ96IZ6 378 aaKnown RBP10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 C8orf48Q96LL4 319 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 HYLS1Q96M11 299 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 COPS8Q99627 209 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 TRAF4Q9BUZ4 470 aaPredicted RBP10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 RACGAP1Q9H0H5 632 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 KCNN2Q9H2S1 579 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 CDCP1Q9H5V8 836 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 PAK6Q9NQU5 681 aaPredicted RBP10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 PRDM5Q9NQX1 630 aaPredicted RBP10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 CLN6Q9NWW5 311 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 TXNL4BQ9NX01 149 aaKnown RBP10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 TMCC3Q9ULS5 477 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 VPS9D1Q9Y2B5 631 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 LAMA2P24043 3122 aaKnown RBP10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 WASH4PA8MWX3 477 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 ALDH1A1P00352 501 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 IGFBP1P08833 259 aaPredicted RBP10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 FAM157BP0CG42 384 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 GPX2P18283 190 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 PBX3P40426 434 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 CLDN20P56880 219 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 CDC42P60953 191 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 CTAG1AP78358 180 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 GANABQ14697 944 aaKnown RBP10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 ZNF284Q2VY69 593 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 MPPE1Q53F39 396 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 TYW3Q6IPR3 259 aaKnown RBP10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 BRAT1Q6PJG6 821 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 OTOP2Q7RTS6 562 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 PDZD3Q86UT5 571 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 C2orf69Q8N8R5 385 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 LKAAEAR1Q8TD35 194 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 SELENOMQ8WWX9 145 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 RIT1Q92963 219 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 MSLNLQ96KJ4 702 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 TRIB3Q96RU7 358 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 FAM129BQ96TA1 746 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 SYT17Q9BSW7 474 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 DPCDQ9BVM2 203 aaPredicted RBP10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 C1QTNF6Q9BXI9 259 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 CD244Q9BZW8 370 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 SPNS1Q9H2V7 528 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 RHCGQ9UBD6 479 aa10.65□□□□□ -0.7
SEMA4D-209ENST00000429836 DOCK4Q8N1I0 1966 aa10.64□□□□□ -0.71
SEMA4D-209ENST00000429836 PRAMEF25A6NGN4 478 aa10.64□□□□□ -0.71
SEMA4D-209ENST00000429836 ISM1B1AKI9 464 aa10.64□□□□□ -0.71
SEMA4D-209ENST00000429836 TPST2O60704 377 aa10.64□□□□□ -0.71
SEMA4D-209ENST00000429836 RAMP2O60895 175 aa10.64□□□□□ -0.71
SEMA4D-209ENST00000429836 TRIM3O75382 744 aaPredicted RBP10.64□□□□□ -0.71
SEMA4D-209ENST00000429836 GCM2O75603 506 aaPredicted RBP10.64□□□□□ -0.71
SEMA4D-209ENST00000429836 SSTR2P30874 369 aa10.64□□□□□ -0.71
SEMA4D-209ENST00000429836 TTPAP49638 278 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms